RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 CCDC197Q8NCU1 140 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 ASPSCR1Q9BZE9 553 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 RASSF4Q9H2L5 321 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 SENP1Q9P0U3 644 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 POC1B-GALNT4F8VUJ3 575 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PRRG1O14668 218 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 LRG1P02750 347 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CHRNA3P32297 505 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 BCAR1P56945 870 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PRAMEP78395 509 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 NR5A1Q13285 461 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 MED21Q13503 144 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 MOV10L1Q9BXT6 1211 aaKnown RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 TEKT2Q9UIF3 430 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PCDHGB4Q9UN71 923 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 DOLKQ9UPQ8 538 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 SLC4A7Q9Y6M7 1214 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PITPNM2Q9BZ72 1349 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 USP32Q8NFA0 1604 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 SMIM24O75264 130 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CLTAP09496 248 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 TMEM270Q6UE05 265 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 NOP9Q86U38 636 aaKnown RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CFAP61Q8NHU2 1237 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 FGD4Q96M96 766 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PSMB7Q99436 277 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 PLEKHA5Q9HAU0 1116 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 SMYD2Q9NRG4 433 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 STX18Q9P2W9 335 aaKnown RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 GSG1L2A8MUP6 293 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 NDUFA10O95299 355 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 HIST1H2AGP0C0S8 130 aaPredicted RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 HIST1H2ADP20671 130 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 OAZ1P54368 228 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CREMQ03060 361 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CRLF3Q8IUI8 442 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 BANK1Q8NDB2 785 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 HIST1H2AHQ96KK5 128 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 HIST1H2AJQ99878 128 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 H2AFJQ9BTM1 129 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 IGSF9BQ9UPX0 1349 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 ODC1P11926 461 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 BRAFP15056 766 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 YWHAHQ04917 246 aaPredicted RBP12.69□□□□□ -0.38
NEK9-210ENST00000557026 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 FKBP1CQ5VVH2 108 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 ARMC6Q6NXE6 501 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 CAPS2Q9BXY5 557 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 YY1AP1Q9H869 796 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PCDHB6Q9Y5E3 794 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
NEK9-210ENST00000557026 PLS3P13797 630 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ABCE1P61221 599 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 IMPG1Q17R60 797 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 SLFNL1Q499Z3 407 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 CYP4A22Q5TCH4 519 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 INTS2Q9H0H0 1204 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 EML4Q9HC35 981 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 ANAPC7Q9UJX3 599 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 RNASEH1O60930 286 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 SPAG6O75602 509 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 GUCY2FP51841 1108 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ESRRGP62508 458 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ATP2C1P98194 919 aaPredicted RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 ART3Q13508 389 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ZNF827Q17R98 1081 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 BBS9Q3SYG4 887 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ITIH5Q86UX2 942 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 FMO2Q99518 471 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 MRPL9Q9BYD2 267 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 NDUFB10O96000 172 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 AKR1B1P15121 316 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 GRIK1P39086 918 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 GEMIN4P57678 1058 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ARHGEF7Q14155 803 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 MAF1Q9H063 256 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 DPEP1P16444 411 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 FOXO4P98177 505 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 SARM1Q6SZW1 724 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 ATP6V0D2Q8N8Y2 350 aa12.68□□□□□ -0.38
NEK9-210ENST00000557026 PPHLN1Q8NEY8 458 aaKnown RBP12.68□□□□□ -0.38
NEK9-210ENST00000557026 SRPK1Q96SB4 655 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms