RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PANK2Q9BZ23 570 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 THEGQ9P2T0 379 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 PCDHA7Q9UN72 937 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 TCHHQ07283 1943 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 B4GALT3O60512 393 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 POMCP01189 267 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 KRT85P78386 507 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 E2F4Q16254 413 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 TCEAL5Q5H9L2 206 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 ZNF280BQ86YH2 543 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 GBP3Q9H0R5 595 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 PTPRHQ9HD43 1115 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 TLR9Q9NR96 1032 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 DNAJB4Q9UDY4 337 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 PARP2Q9UGN5 583 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 ATP6V1DQ9Y5K8 247 aa25.11■■□□□ 1.61
TDP1-216ENST00000556867 MYMKA6NI61 221 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 DDHD2O94830 711 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 GALTP07902 379 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 PROZP22891 400 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 SCNN1GP51170 649 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 HAUS6Q7Z4H7 955 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 GSTCDQ8NEC7 633 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 DDX12PQ92771 950 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 FIZ1Q96SL8 496 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 TMEM175Q9BSA9 504 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 CDT1Q9H211 546 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 CUEDC2Q9H467 287 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 PUF60Q9UHX1 559 aaKnown RBP25.1■■□□□ 1.61
TDP1-216ENST00000556867 COG5Q9UP83 839 aa25.1■■□□□ 1.61
TDP1-216ENST00000556867 K7ENM7 598 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 ABLIM1O14639 778 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 TRAK2O60296 914 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 RECQL4O94761 1208 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 CSPG5O95196 566 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 IRS1P35568 1242 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 SLC11A1P49279 550 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 KRT17Q04695 432 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 DSC1Q08554 894 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 ZNF568Q3ZCX4 644 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 ZPBP2Q6X784 338 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 DYMQ7RTS9 669 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 DNAJC19Q96DA6 116 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 FAM193BQ96PV7 902 aaPredicted RBP25.09■■□□□ 1.61
TDP1-216ENST00000556867 ZHX3Q9H4I2 956 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 MIOSQ9NXC5 875 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 SNTG2Q9NY99 539 aa25.09■■□□□ 1.61
TDP1-216ENST00000556867 NT5C1B-RDH14C9J2C7 533 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 FSCN2O14926 492 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 ABCD1P33897 745 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 GRIK3Q13003 919 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 COL19A1Q14993 1142 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 RESP18Q5W5W9 173 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 PDE12Q6L8Q7 609 aaKnown RBP25.08■■□□□ 1.61
TDP1-216ENST00000556867 MPZL3Q6UWV2 235 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 TMEM173Q86WV6 379 aaPredicted RBP25.08■■□□□ 1.61
TDP1-216ENST00000556867 FAM178BQ8IXR5 827 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 LEO1Q8WVC0 666 aaPredicted RBP25.08■■□□□ 1.61
TDP1-216ENST00000556867 ATXN2LQ8WWM7 1075 aaKnown RBP25.08■■□□□ 1.61
TDP1-216ENST00000556867 TMEM169Q96HH4 297 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 CHAMP1Q96JM3 812 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 RPS6KC1Q96S38 1066 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 KLK14Q9P0G3 267 aa25.08■■□□□ 1.61
TDP1-216ENST00000556867 TOM1L1O75674 476 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 MCF2P10911 925 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 ERVFC1P60507 584 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 COLGALT2Q8IYK4 626 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 IQUBQ8NA54 791 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 HLA-CQ95604 372 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 PPP2R3CQ969Q6 453 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 IGSF21Q96ID5 467 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 SPATA32Q96LK8 384 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 TNMDQ9H2S6 317 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 ST6GALNAC4Q9H4F1 302 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 FAM13BQ9NYF5 915 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 SEL1LQ9UBV2 794 aa25.07■■□□□ 1.6
TDP1-216ENST00000556867 SPTBN5Q9NRC6 3674 aaKnown RBP25.07■■□□□ 1.6
TDP1-216ENST00000556867 TRIP11Q15643 1979 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 GAP43P17677 238 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 GRM5P41594 1212 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 SFR1Q86XK3 245 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 BCL7CQ8WUZ0 217 aaPredicted RBP25.06■■□□□ 1.6
TDP1-216ENST00000556867 DHX58Q96C10 678 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 KBTBD4Q9NVX7 518 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 TBX20Q9UMR3 447 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 GDAQ9Y2T3 454 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 A0A0C4DFX4 3053 aa25.06■■□□□ 1.6
TDP1-216ENST00000556867 CITO14578 2027 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 NCK2O43639 380 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 PIGRP01833 764 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 ALDH2P05091 517 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 NMT1P30419 496 aaKnown RBP25.05■■□□□ 1.6
TDP1-216ENST00000556867 NUCB2P80303 420 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 GTF2BQ00403 316 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 HYAL1Q12794 435 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 ADGRD2Q7Z7M1 963 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 CEP120Q8N960 986 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 TCHPQ9BT92 498 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 CCDC94Q9BW85 323 aaPredicted RBP25.05■■□□□ 1.6
TDP1-216ENST00000556867 LRRC27Q9C0I9 530 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms