RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 FIP1L1Q6UN15 594 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 FAM160B2Q86V87 743 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 LRRC43Q8N309 656 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 IL31RAQ8NI17 732 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 PIGOQ8TEQ8 1089 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ATP6V0A1Q93050 837 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SPAG5Q96R06 1193 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 MYO1AQ9UBC5 1043 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 XPO7Q9UIA9 1087 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CDC23Q9UJX2 597 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 FEM1BQ9UK73 627 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 DNM3Q9UQ16 869 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 MRPL42Q9Y6G3 142 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 OTOFQ9HC10 1997 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 FAM25EA8MYX2 175 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 LCA5LO95447 670 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 EYA4O95677 639 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 NFX1Q12986 1120 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 BMT2Q1RMZ1 405 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 EDRF1Q3B7T1 1238 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 C1orf186Q6ZWK4 172 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SAMD7Q7Z3H4 446 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SIX5Q8N196 739 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 HDAC7Q8WUI4 952 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SGIP1Q9BQI5 828 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 HAUS4Q9H6D7 363 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 BMP2KQ9NSY1 1161 aaPredicted RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ABCF3Q9NUQ8 709 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 DNAAF2Q9NVR5 837 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 TBKBP1A7MCY6 615 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 HSPA8P11142 646 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 CENPAP49450 140 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TAF1CQ15572 869 aaPredicted RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 Q3C1V9 767 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 DALRD3Q5D0E6 543 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TMCO3Q6UWJ1 677 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 GPIHBP1Q8IV16 184 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 CCDC170Q8IYT3 715 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 DYDC2Q96IM9 177 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 WNK4Q96J92 1243 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TSG101Q99816 390 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 PARD6BQ9BYG5 372 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 LUC7LQ9NQ29 371 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 OLFML3Q9NRN5 406 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 GUCA1BQ9UMX6 200 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 MRPL11Q9Y3B7 192 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 FRMPD4Q14CM0 1322 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SFI1A8K8P3 1242 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 FOXN3O00409 490 aaPredicted RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 DHX15O43143 795 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TGFB1I1O43294 461 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 CHMP2AO43633 222 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 PRPF6O94906 941 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 NR2F2P24468 414 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF76P36508 570 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 MRPS9P82933 396 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TNIP1Q15025 636 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 KNOP1Q1ED39 458 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 IRGCQ6NXR0 463 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TRAPPC11Q7Z392 1133 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SRGAP1Q7Z6B7 1085 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 LRRC49Q8IUZ0 686 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 IQCDQ96DY2 449 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 RNPC3Q96LT9 517 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 NAPGQ99747 312 aaPredicted RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 KIAA1683Q9H0B3 1180 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ACBD3Q9H3P7 528 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SH2D4AQ9H788 454 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 MMRN2Q9H8L6 949 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TUFT1Q9NNX1 390 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 PCDH12Q9NPG4 1184 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 PLSCR2Q9NRY7 297 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TRPC6Q9Y210 931 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 C2CD2Q9Y426 696 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 FHOD1Q9Y613 1164 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SSC5DA1L4H1 1573 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ZNFX1Q9P2E3 1918 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 CTAGE9A4FU28 777 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 C2orf81A6NN90 581 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ENC1O14682 589 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 WDR46O15213 610 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SART1O43290 800 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 AKAP3O75969 853 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ATP1A1P05023 1023 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 EZRP15311 586 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SPP2Q13103 211 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ADAM9Q13443 819 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SIM2Q14190 667 aaPredicted RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 MAP7Q14244 749 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 PSMD6Q15008 389 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 PDXDC1Q6P996 788 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 KRT77Q7Z794 578 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 TADA2BQ86TJ2 420 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 DAW1Q8N136 415 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ARHGEF2Q92974 986 aaKnown RBP5.47□□□□□ -1.53
TMEM260-210ENST00000556422 CORO1BQ9BR76 489 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 GANQ9H2C0 597 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 ANKZF1Q9H8Y5 726 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SLC38A10Q9HBR0 1119 aa5.47□□□□□ -1.53
TMEM260-210ENST00000556422 SALL4Q9UJQ4 1053 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms