RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 DMP1Q13316 513 aaPredicted RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 BTG3Q14201 252 aaPredicted RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 SWT1Q5T5J6 900 aaKnown RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 EEF1DP3Q658K8 133 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 AGMOQ6ZNB7 445 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 PDILTQ8N807 584 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 LPPQ93052 612 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 SPATA32Q96LK8 384 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 TMEM117Q9H0C3 514 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 PDZD7Q9H5P4 517 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 PTPRHQ9HD43 1115 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 KMT5AQ9NQR1 393 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 KCNG1Q9UIX4 513 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 HPSEQ9Y251 543 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 MRPL42Q9Y6G3 142 aaKnown RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 A0A1W2PQ27 194 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 A0A1W2PQ64 194 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 A0A1W2PQD8 194 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 FRMD3A2A2Y4 597 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 TBKBP1A7MCY6 615 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 C5orf67F2Z3F1 127 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 RFXAPO00287 272 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 ABLIM1O14639 778 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 INPPL1O15357 1258 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 POLR2DO15514 142 aaKnown RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 HOXA2O43364 376 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 PRPF4BQ13523 1007 aaKnown RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 PAN2Q504Q3 1202 aaKnown RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 EPC2Q52LR7 807 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 CNNM4Q6P4Q7 775 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 CDR2LQ86X02 465 aaPredicted RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 TMEM192Q8IY95 271 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 IQUBQ8NA54 791 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 CNNM3Q8NE01 707 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 MYLIPQ8WY64 445 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 ARNTL2Q8WYA1 636 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 DHX58Q96C10 678 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 SAMD11Q96NU1 681 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 ACO2Q99798 780 aaKnown RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 STRA6Q9BX79 667 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 TNMDQ9H2S6 317 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 CUEDC2Q9H467 287 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 ST6GALNAC4Q9H4F1 302 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 CWH43Q9H720 699 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 PARVGQ9HBI0 331 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 TYW1Q9NV66 732 aaKnown RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 LARSQ9P2J5 1176 aaKnown RBP10.62□□□□□ -0.71
SRP54-210ENST00000556380 KCNH3Q9ULD8 1083 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 IPPQ9Y573 584 aa10.62□□□□□ -0.71
SRP54-210ENST00000556380 PHLPP2Q6ZVD8 1323 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 SPTBN5Q9NRC6 3674 aaKnown RBP10.61□□□□□ -0.71
SRP54-210ENST00000556380 MYO7AQ13402 2215 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 PRRC2BQ5JSZ5 2229 aaKnown RBP10.61□□□□□ -0.71
SRP54-210ENST00000556380 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 N4BP3O15049 544 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 ACTN4O43707 911 aaKnown RBP10.61□□□□□ -0.71
SRP54-210ENST00000556380 FAM13AO94988 1023 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 RB1P06400 928 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 PFKFB1P16118 471 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 PROZP22891 400 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 ANP32AP39687 249 aaKnown RBP10.61□□□□□ -0.71
SRP54-210ENST00000556380 AFF1P51825 1210 aaKnown RBP10.61□□□□□ -0.71
SRP54-210ENST00000556380 SMTNP53814 917 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 LONRF3Q496Y0 759 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 DYMQ7RTS9 669 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 HAUS6Q7Z4H7 955 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 MYCT1Q8N699 235 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 RNF169Q8NCN4 708 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 HELQQ8TDG4 1101 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 RSPH1Q8WYR4 309 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 STAMQ92783 540 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 PGBD4Q96DM1 585 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 C7orf25Q9BPX7 421 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 TARS2Q9BW92 718 aaKnown RBP10.61□□□□□ -0.71
SRP54-210ENST00000556380 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 MTUS1Q9ULD2 1270 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 TNFSF13BQ9Y275 285 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 STXBP5LQ9Y2K9 1186 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 HES2Q9Y543 173 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 PRUNE2Q8WUY3 3088 aa10.61□□□□□ -0.71
SRP54-210ENST00000556380 A0A0C4DFX4 3053 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 H3BNC9 293 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 TRAK2O60296 914 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 NPTXRO95502 500 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 KRT18P05783 430 aaKnown RBP10.6□□□□□ -0.71
SRP54-210ENST00000556380 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 LIG1P18858 919 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 SCP2P22307 547 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 NMT1P30419 496 aaKnown RBP10.6□□□□□ -0.71
SRP54-210ENST00000556380 GTF2BQ00403 316 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 NOMO2Q5JPE7 1267 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 ATF7IP2Q5U623 682 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 GLB1LQ6UWU2 654 aa10.6□□□□□ -0.71
SRP54-210ENST00000556380 ZPBP2Q6X784 338 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms