RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
PRPF39-209ENST00000556353 KCNH6Q9H252 994 aa7.07□□□□□ -1.28
PRPF39-209ENST00000556353 SPON1Q9HCB6 807 aa7.07□□□□□ -1.28
PRPF39-209ENST00000556353 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
PRPF39-209ENST00000556353 B5MCH6 92 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 OVOL3O00110 214 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 ITGA10O75578 1167 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 ITGB1P05556 798 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 NR4A1P22736 598 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 INHBEP58166 350 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 LY6G5CQ5SRR4 150 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 SDE2Q6IQ49 451 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 LRRC55Q6ZSA7 311 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 PDZD4Q76G19 769 aaPredicted RBP7.06□□□□□ -1.28
PRPF39-209ENST00000556353 RHOUQ7L0Q8 258 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 GPRIN1Q7Z2K8 1008 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 ZNF480Q8WV37 535 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 DCLRE1CQ96SD1 692 aaKnown RBP7.06□□□□□ -1.28
PRPF39-209ENST00000556353 TTPALQ9BTX7 342 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 GPRC5DQ9NZD1 345 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 DPP7Q9UHL4 492 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 EDARQ9UNE0 448 aa7.06□□□□□ -1.28
PRPF39-209ENST00000556353 ABHD16AO95870 558 aa7.05□□□□□ -1.28
PRPF39-209ENST00000556353 KRT4P19013 534 aa7.05□□□□□ -1.28
PRPF39-209ENST00000556353 APOBEC3AP31941 199 aaPredicted RBP7.05□□□□□ -1.28
PRPF39-209ENST00000556353 SMN1Q16637 294 aaKnown RBP7.05□□□□□ -1.28
PRPF39-209ENST00000556353 Q6ZPA2 131 aa7.05□□□□□ -1.28
PRPF39-209ENST00000556353 RPUSD2Q8IZ73 545 aaKnown RBP7.05□□□□□ -1.28
PRPF39-209ENST00000556353 LILRA3Q8N6C8 439 aaPredicted RBP7.05□□□□□ -1.28
PRPF39-209ENST00000556353 MDM1Q8TC05 714 aa7.05□□□□□ -1.28
PRPF39-209ENST00000556353 PROKR1Q8TCW9 393 aa7.05□□□□□ -1.28
PRPF39-209ENST00000556353 ZMYM3Q14202 1370 aa7.05□□□□□ -1.28
PRPF39-209ENST00000556353 RPTORQ8N122 1335 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 AHRRA9YTQ3 701 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 PHF2O75151 1096 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 LAG3P18627 525 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 CRHR1P34998 444 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 MASP1P48740 699 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 CDK17Q00537 523 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 PTPAQ15257 358 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 TIGD2Q4W5G0 525 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 LAIR1Q6GTX8 287 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 KCNV1Q6PIU1 500 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 MLST8Q9BVC4 326 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 SLC46A2Q9BY10 475 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 DMRT1Q9Y5R6 373 aa7.04□□□□□ -1.28
PRPF39-209ENST00000556353 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 FOXN1O15353 648 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 CLSTN1O94985 981 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 CPEP16870 476 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 MGAT1P26572 445 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 CANXP27824 592 aaKnown RBP7.03□□□□□ -1.28
PRPF39-209ENST00000556353 MRPS9P82933 396 aaKnown RBP7.03□□□□□ -1.28
PRPF39-209ENST00000556353 ANKS6Q68DC2 871 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 EFCAB12Q6NXP0 572 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 DRICH1Q6PGQ1 229 aaPredicted RBP7.03□□□□□ -1.28
PRPF39-209ENST00000556353 GDF7Q7Z4P5 450 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 AFAP1L2Q8N4X5 818 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 AUTS2Q8WXX7 1259 aa7.03□□□□□ -1.28
PRPF39-209ENST00000556353 ZNF768Q9H5H4 540 aaKnown RBP7.03□□□□□ -1.28
PRPF39-209ENST00000556353 TBKBP1A7MCY6 615 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 LEFTY2O00292 366 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 MTHFD2P13995 350 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 FSTL1Q12841 308 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 FAPQ12884 760 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 STAT4Q14765 748 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 BTNL9Q6UXG8 535 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 OR10H5Q8NGA6 315 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 TGFBRAP1Q8WUH2 860 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 LMBR1Q8WVP7 490 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 TFAP2CQ92754 450 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 POGKQ9P215 609 aa7.02□□□□□ -1.29
PRPF39-209ENST00000556353 DIRC3C9JPN6 131 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 RNASET2O00584 256 aaKnown RBP7.01□□□□□ -1.29
PRPF39-209ENST00000556353 AKR1B10O60218 316 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 CCT2P78371 535 aaKnown RBP7.01□□□□□ -1.29
PRPF39-209ENST00000556353 TMPRSS15P98073 1019 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 NHLH2Q02577 135 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 MST1LQ2TV78 715 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 PRAMEF14Q5SWL7 426 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 GJC2Q5T442 439 aaPredicted RBP7.01□□□□□ -1.29
PRPF39-209ENST00000556353 PCSK4Q6UW60 755 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 FAM180AQ6UWF9 173 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 CMIPQ8IY22 773 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 GPR156Q8NFN8 814 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 MYEOVQ96EZ4 313 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 AGAP2Q99490 1192 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 QRSL1Q9H0R6 528 aaKnown RBP7.01□□□□□ -1.29
PRPF39-209ENST00000556353 HS3ST4Q9Y661 456 aa7.01□□□□□ -1.29
PRPF39-209ENST00000556353 RBP3P10745 1247 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 ZFP36P26651 326 aaKnown RBP7□□□□□ -1.29
PRPF39-209ENST00000556353 ADSLP30566 484 aaPredicted RBP7□□□□□ -1.29
PRPF39-209ENST00000556353 FLT3LGP49771 235 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 SCAND1P57086 179 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 RNASE9P60153 205 aaKnown RBP7□□□□□ -1.29
PRPF39-209ENST00000556353 FAM189BP81408 668 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 CSRP2Q16527 193 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms