RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 NGRNQ9NPE2 291 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 FAM105AQ9NUU6 356 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 LZTS1Q9Y250 596 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 TECTAO75443 2155 aa7.46□□□□□ -1.21
PSEN1-216ENST00000556066 FSD2A1L4K1 749 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 MEIS3P2A8K0S8 358 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 BTBD18B2RXH4 712 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 JAK2O60674 1132 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 WFS1O76024 890 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 ERLIN2O94905 339 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 CXCL14O95715 111 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 ATP2B1P20020 1258 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 SP100P23497 879 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 TXKP42681 527 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 RAB27AP51159 221 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 GUCY1B3Q02153 619 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 MCM6Q14566 821 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 BMS1Q14692 1282 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 EMC2Q15006 297 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 NOMO2Q5JPE7 1267 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 RETREG3Q86VR2 466 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 C4orf19Q8IY42 314 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 DIS3L2Q8IYB7 885 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 VPS52Q8N1B4 723 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 SLC39A11Q8N1S5 342 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 RNF149Q8NC42 400 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 NSUN7Q8NE18 718 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 TCP11Q8WWU5 503 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 AUTS2Q8WXX7 1259 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 THAP11Q96EK4 314 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 CCDC43Q96MW1 224 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 EIF2AK1Q9BQI3 630 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 DHX33Q9H6R0 707 aaKnown RBP7.46□□□□□ -1.22
PSEN1-216ENST00000556066 ZSWIM4Q9H7M6 989 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 MINDY3Q9H8M7 445 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 IFT122Q9HBG6 1241 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 TBC1D13Q9NVG8 400 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 PCDHA12Q9UN75 941 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 PCDHB2Q9Y5E7 798 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 FAM186AA6NE01 2351 aa7.46□□□□□ -1.22
PSEN1-216ENST00000556066 ZNF292O60281 2723 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 A0A087WWV3 80 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 C2orf71A6NGG8 1288 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 CFAP99D6REC4 459 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 NEMFO60524 1076 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 OFD1O75665 1012 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 AP1G2O75843 785 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 SLITRK3O94933 977 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 S1PR4O95977 384 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 MCM7P33993 719 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 SPIRE1Q08AE8 756 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 HERC4Q5GLZ8 1057 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 ANKRD54Q6NXT1 300 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 RNF19BQ6ZMZ0 732 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 HFE2Q6ZVN8 426 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 SRGAP1Q7Z6B7 1085 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 FERMT3Q86UX7 667 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 TMEM173Q86WV6 379 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 MRPL43Q8N983 215 aaKnown RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 URGCPQ8TCY9 931 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 PIGOQ8TEQ8 1089 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 TNFRSF25Q93038 417 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 PHF7Q9BWX1 381 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 NRDE2Q9H7Z3 1164 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 TTC12Q9H892 705 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-216ENST00000556066 AGPAT5Q9NUQ2 364 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 DNAJB4Q9UDY4 337 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 CDH22Q9UJ99 828 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 PPME1Q9Y570 386 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 HCFC2Q9Y5Z7 792 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 NCOR2Q9Y618 2525 aa7.45□□□□□ -1.22
PSEN1-216ENST00000556066 LOC730098B7Z3J9 87 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 INO80B-WBP1J3KQ70 363 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 WNT7AO00755 349 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 ASAP2O43150 1006 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 GAS2O43903 313 aaKnown RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 GDF9O60383 454 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 CLASP2O75122 1294 aaKnown RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 ZNF623O75123 536 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 POMCP01189 267 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 SSBP05455 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 GALTP07902 379 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 WEE2P0C1S8 567 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 HOXB8P17481 243 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 HOXA11P31270 313 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 NCBP1Q09161 790 aaKnown RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 GNL2Q13823 731 aaKnown RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 KCNC3Q14003 757 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 TFDP1Q14186 410 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 MXD4Q14582 209 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 SAFBQ15424 915 aaKnown RBP eCLIP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 CES5AQ6NT32 575 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 SYCE2Q6PIF2 218 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 TMEM184AQ6ZMB5 413 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms