RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MGEA5O60502 916 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 CLTAP09496 248 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 HARSP12081 509 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 ATP2A2P16615 1042 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 IBSPP21815 317 aaPredicted RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 PROZP22891 400 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 RPL13P26373 211 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 POU5F1Q01860 360 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 MCL1Q07820 350 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 KCNA1Q09470 495 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 MYBPC2Q14324 1141 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 SHHQ15465 462 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 CT47A1Q5JQC4 288 aaPredicted RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 UBXN11Q5T124 520 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 EEF1DP3Q658K8 133 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 ISM2Q6H9L7 571 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 GLB1LQ6UWU2 654 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 RBM43Q6ZSC3 357 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 MRPL10Q7Z7H8 261 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 ZBTB33Q86T24 672 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 RTN4RL1Q86UN2 441 aaPredicted RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 TDHQ8IZJ6 230 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 RNF169Q8NCN4 708 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 VWCEQ96DN2 955 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 ACAP3Q96P50 834 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 MSTO1Q9BUK6 570 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 FGFBP2Q9BYJ0 223 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 CDT1Q9H211 546 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 KIAA1586Q9HCI6 787 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 PTPRHQ9HD43 1115 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 TOPORSQ9NS56 1045 aaPredicted RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 ANO10Q9NW15 660 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 AGO2Q9UKV8 859 aaKnown RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 MAPK8IP1Q9UQF2 711 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 IPPQ9Y573 584 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
TDP1-214ENST00000556063 STYXL1Q9Y6J8 313 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 CITO14578 2027 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 A0A0B4J269 797 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 CARNS1A5YM72 827 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 TTLL13PA6NNM8 815 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 UPP2O95045 317 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 FGFR1OPO95684 399 aaKnown RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 GRM5P41594 1212 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 PRCPP42785 496 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 NLRP12P59046 1061 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 LRRC63Q05C16 580 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 STX1AQ16623 288 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 EDRF1Q3B7T1 1238 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 C9orf50Q5SZB4 431 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 KLHL10Q6JEL2 608 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
TDP1-214ENST00000556063 CDR2LQ86X02 465 aaPredicted RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 HERC6Q8IVU3 1022 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 CD302Q8IX05 232 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 C12orf56Q8IXR9 622 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 THNSL1Q8IYQ7 743 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 ADSSL1Q8N142 457 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 XXYLT1Q8NBI6 393 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 URGCPQ8TCY9 931 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 LINC01599Q8WXQ3 324 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 P2RX5Q93086 422 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 TOP1MTQ969P6 601 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 ZBTB45Q96K62 511 aaPredicted RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 RPS6KC1Q96S38 1066 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 TSPAN18Q96SJ8 248 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 YME1L1Q96TA2 773 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 APOL6Q9BWW8 343 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 EIF2AQ9BY44 585 aaKnown RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 MRPL9Q9BYD2 267 aaKnown RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 NAT10Q9H0A0 1025 aaKnown RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 RPF1Q9H9Y2 349 aaKnown RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 RSAD1Q9HA92 442 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 AGPAT3Q9NRZ7 376 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
TDP1-214ENST00000556063 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 KANSL3Q9P2N6 904 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 TRAF3IP3Q9Y228 551 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 USP20Q9Y2K6 914 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 GIT1Q9Y2X7 761 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 INSL6Q9Y581 213 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 ZMYM2Q9UBW7 1377 aa8.33□□□□□ -1.08
TDP1-214ENST00000556063 ZNF233A6NK53 670 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 ABLIM1O14639 778 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 CETN3O15182 167 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 TGFB1I1O43294 461 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 TLL1O43897 1013 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 EXTL3O43909 919 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 EXOC3O60645 756 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 RECQL4O94761 1208 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 GJB5O95377 273 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms