RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 FLT3P36888 993 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 GCLMP48507 274 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 MXI1P50539 228 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PMS2P54278 862 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 DRG2P55039 364 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 MFAP3P55082 362 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 MAGOHP61326 146 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 POU5F1Q01860 360 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 ZNF211Q13398 564 aaPredicted RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 DLGAP5Q15398 846 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 ICE2Q659A1 982 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 CCDC121Q6ZUS5 278 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 NIPA1Q7RTP0 329 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 USP37Q86T82 979 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 JAMLQ86YT9 394 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 C12orf56Q8IXR9 622 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 RPUSD2Q8IZ73 545 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 DAW1Q8N136 415 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 OGFOD1Q8N543 542 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 OLIG1Q8TAK6 271 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 SLC20A1Q8WUM9 679 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 TMEM174Q8WUU8 243 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 FAM151AQ8WW52 585 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 CYFIP2Q96F07 1278 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 ZSWIM1Q9BR11 485 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PLVAPQ9BX97 442 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 WNT8AQ9H1J5 351 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PCIF1Q9H4Z3 704 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 KCNH7Q9NS40 1196 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 TAS2R14Q9NYV8 317 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 HSPBP1Q9NZL4 362 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PKD2L1Q9P0L9 805 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 SLC12A6Q9UHW9 1150 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 COG5Q9UP83 839 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 EXOC7Q9UPT5 735 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ALG6Q9Y672 507 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PSME4Q14997 1843 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 GOLGA6L7A0A1B0GV03 622 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 CLRN2A0PK11 232 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 TULP1O00294 542 aaPredicted RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 SPOPO43791 374 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ICAM1P05362 532 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PAEPP09466 180 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 NUDT17P0C025 328 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 GZMAP12544 262 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 QARSP47897 775 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 HSD17B4P51659 736 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 SMTNP53814 917 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PLTPP55058 493 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 IFT88Q13099 833 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 BYSLQ13895 437 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 PLCB4Q15147 1175 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 EPC2Q52LR7 807 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 GKAP1Q5VSY0 366 aaPredicted RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 B3GNT9Q6UX72 402 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PALB2Q86YC2 1186 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 RTKN2Q8IZC4 609 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 LMO3Q8TAP4 145 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ATP8B4Q8TF62 1192 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ALG3Q92685 438 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 KIFAP3Q92845 792 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 GLG1Q92896 1179 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 FAM129AQ9BZQ8 928 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PABPC3Q9H361 631 aaKnown RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 TBC1D22BQ9NU19 505 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 TMOD4Q9NZQ9 345 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 ZNF70Q9UC06 446 aaPredicted RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 PASKQ96RG2 1323 aa7.52□□□□□ -1.2
TDP1-213ENST00000555880 VGLL3A8MV65 326 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 KIAA0391O15091 583 aaKnown RBP7.52□□□□□ -1.21
TDP1-213ENST00000555880 PMM2O15305 246 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 C21orf2O43822 256 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 MTA2O94776 668 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ITGB5P18084 799 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 YWHABP31946 246 aaKnown RBP7.52□□□□□ -1.21
TDP1-213ENST00000555880 PDE6CP51160 858 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 DLG4P78352 724 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 PPP3CAQ08209 521 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ADCY2Q08462 1091 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 MTMR1Q13613 665 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 MESDQ14696 234 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 SLMAPQ14BN4 828 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 DEFB132Q7Z7B7 95 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 CPLX4Q7Z7G2 160 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 LAPTM4BQ86VI4 370 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ARHGEF19Q8IW93 802 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
TDP1-213ENST00000555880 CACNA2D3Q8IZS8 1091 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 CNPY4Q8N129 248 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 PPM1KQ8N3J5 372 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms