RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 B4GALT5O43286 388 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TGFB1I1O43294 461 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 EXTL3O43909 919 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 CLSTN1O94985 981 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 CHRNA1P02708 482 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 RAG1P15918 1043 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 ARF4P18085 180 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 MNX1P50219 401 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 MCL1Q07820 350 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 IQCB1Q15051 598 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TRIM71Q2Q1W2 868 aaKnown RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TCP11X2Q5H9J9 407 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 DCAF17Q5H9S7 520 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 FBXO47Q5MNV8 452 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TCERG1LQ5VWI1 586 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TAS1R3Q7RTX0 852 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 FILIP1Q7Z7B0 1213 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TMEM199Q8N511 208 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 FNBP1Q96RU3 617 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 NOC4LQ9BVI4 516 aaKnown RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 PCIF1Q9H4Z3 704 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 PDZD7Q9H5P4 517 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 MINDY3Q9H8M7 445 aa12.2□□□□□ -0.46
SHMT2-220ENST00000555634 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 R3HCC1Q9Y3T6 440 aaKnown RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-220ENST00000555634 A0A0B4J269 797 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 IL18RAPO95256 599 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 PFKMP08237 780 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 EN2P19622 333 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-220ENST00000555634 BFSP1Q12934 665 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 LPIN1Q14693 890 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 CDKAL1Q5VV42 579 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 FAM228AQ86W67 206 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 WNT8BQ93098 351 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 PGBD4Q96DM1 585 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 SAAL1Q96ER3 474 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 CPB2Q96IY4 423 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
SHMT2-220ENST00000555634 CBWD1Q9BRT8 395 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 FAM213AQ9BRX8 229 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 PPP1R12CQ9BZL4 782 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 C1orf112Q9NSG2 853 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 ST3GAL5Q9UNP4 418 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 NOC2LQ9Y3T9 749 aaKnown RBP12.19□□□□□ -0.46
SHMT2-220ENST00000555634 STYXL1Q9Y6J8 313 aa12.19□□□□□ -0.46
SHMT2-220ENST00000555634 TRIP11Q15643 1979 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 A0A1B0GUA9 196 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 CCDC85CA6NKD9 419 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 ANKRD63C9JTQ0 380 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 XPOTO43592 962 aaKnown RBP12.18□□□□□ -0.46
SHMT2-220ENST00000555634 CSDE1O75534 798 aaKnown RBP12.18□□□□□ -0.46
SHMT2-220ENST00000555634 NPTXRO95502 500 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 TPM1P09493 284 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 CLTAP09496 248 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 ACTN1P12814 892 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 FGFR4P22455 802 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 PROZP22891 400 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 CD52P31358 61 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 HOXD13P35453 343 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 POU5F1Q01860 360 aaKnown RBP12.18□□□□□ -0.46
SHMT2-220ENST00000555634 ENPEPQ07075 957 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 FAAP100Q0VG06 881 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 AMHR2Q16671 573 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 GAS2L3Q86XJ1 694 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 ZC3H3Q8IXZ2 948 aaKnown RBP12.18□□□□□ -0.46
SHMT2-220ENST00000555634 THNSL1Q8IYQ7 743 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 TMEM40Q8WWA1 233 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 RPS6KC1Q96S38 1066 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 TUBGCP2Q9BSJ2 902 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 CDT1Q9H211 546 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 RPF1Q9H9Y2 349 aaKnown RBP12.18□□□□□ -0.46
SHMT2-220ENST00000555634 ERVK-5Q9HDB9 667 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
SHMT2-220ENST00000555634 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
SHMT2-220ENST00000555634 EVI5O60447 810 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 EFCAB14O75071 495 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 IQCF3P0C7M6 154 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 GRM5P41594 1212 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 VAMP7P51809 220 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 AP3M2P53677 418 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 MARSP56192 900 aaKnown RBP12.17□□□□□ -0.46
SHMT2-220ENST00000555634 UBASH3AP57075 661 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 NCAPHQ15003 741 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 SLC39A4Q6P5W5 647 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 CD302Q8IX05 232 aa12.17□□□□□ -0.46
SHMT2-220ENST00000555634 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms