RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SLC52A1Q9NWF4 448 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 EIF2B4Q9UI10 523 aaKnown RBP7.13□□□□□ -1.27
VRK1-203ENST00000555067 KDM1AO60341 852 aa7.12□□□□□ -1.27
VRK1-203ENST00000555067 DALRD3Q5D0E6 543 aaKnown RBP7.12□□□□□ -1.27
VRK1-203ENST00000555067 RNF187Q5TA31 235 aaPredicted RBP7.12□□□□□ -1.27
VRK1-203ENST00000555067 BBC3Q96PG8 261 aaPredicted RBP7.12□□□□□ -1.27
VRK1-203ENST00000555067 LSM14BQ9BX40 385 aaKnown RBP7.12□□□□□ -1.27
VRK1-203ENST00000555067 SLC46A2Q9BY10 475 aa7.12□□□□□ -1.27
VRK1-203ENST00000555067 PRSS50Q9UI38 385 aa7.12□□□□□ -1.27
VRK1-203ENST00000555067 HS3ST4Q9Y661 456 aa7.12□□□□□ -1.27
VRK1-203ENST00000555067 LCHNA4D1U4 455 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 PARNO95453 639 aaKnown RBP7.11□□□□□ -1.27
VRK1-203ENST00000555067 LTA4HP09960 611 aaKnown RBP7.11□□□□□ -1.27
VRK1-203ENST00000555067 DDB1Q16531 1140 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 KIAA0907Q7Z7F0 614 aaPredicted RBP7.11□□□□□ -1.27
VRK1-203ENST00000555067 GLCCI1Q86VQ1 547 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 VRK3Q8IV63 474 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 OR14C36Q8NHC7 312 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 ZCRB1Q8TBF4 217 aaKnown RBP7.11□□□□□ -1.27
VRK1-203ENST00000555067 DCLRE1CQ96SD1 692 aaKnown RBP7.11□□□□□ -1.27
VRK1-203ENST00000555067 NDC1Q9BTX1 674 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 MLST8Q9BVC4 326 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 MS4A5Q9H3V2 200 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 EMC7Q9NPA0 242 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 EVLQ9UI08 416 aaPredicted RBP7.11□□□□□ -1.27
VRK1-203ENST00000555067 TMPRSS11EQ9UL52 423 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 COL4A3BPQ9Y5P4 624 aa7.11□□□□□ -1.27
VRK1-203ENST00000555067 GRID2IPA4D2P6 1211 aa7.1□□□□□ -1.27
VRK1-203ENST00000555067 MASP2O00187 686 aa7.1□□□□□ -1.27
VRK1-203ENST00000555067 LAG3P18627 525 aa7.1□□□□□ -1.27
VRK1-203ENST00000555067 TIGD2Q4W5G0 525 aa7.1□□□□□ -1.27
VRK1-203ENST00000555067 SLC5A5Q92911 643 aa7.1□□□□□ -1.27
VRK1-203ENST00000555067 LOC102724159A0A0B4J2E5 919 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 GSG1L2A8MUP6 293 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 PRR5-ARHGAP8B1AHC4 643 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 PRAMEF4O60810 478 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 PWP2Q15269 919 aaKnown RBP7.09□□□□□ -1.27
VRK1-203ENST00000555067 BROXQ5VW32 411 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 SYCE2Q6PIF2 218 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 SLC41A1Q8IVJ1 513 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 FAM9AQ8IZU1 332 aaPredicted RBP7.09□□□□□ -1.27
VRK1-203ENST00000555067 PAWRQ96IZ0 340 aaKnown RBP7.09□□□□□ -1.27
VRK1-203ENST00000555067 CDC5LQ99459 802 aaKnown RBP7.09□□□□□ -1.27
VRK1-203ENST00000555067 ANO3Q9BYT9 981 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 RIOX1Q9H6W3 641 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 PCDH12Q9NPG4 1184 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 ZNHIT2Q9UHR6 403 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 RIPOR2Q9Y4F9 1068 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 COL4A3Q01955 1670 aa7.09□□□□□ -1.27
VRK1-203ENST00000555067 B5MCH6 92 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 DIRC3C9JPN6 131 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 INO80B-WBP1J3KQ70 363 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 ENPP3O14638 875 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 APOBEC3AP31941 199 aaPredicted RBP7.08□□□□□ -1.28
VRK1-203ENST00000555067 APBA1Q02410 837 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 UBE3CQ15386 1083 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 C19orf54Q5BKX5 351 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 CCDC181Q5TID7 509 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 CCDC62Q6P9F0 684 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 GPRIN1Q7Z2K8 1008 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 GDF7Q7Z4P5 450 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 RASSF3Q86WH2 238 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 LYSMD2Q8IV50 215 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 MYEOVQ96EZ4 313 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 INO80BQ9C086 356 aaPredicted RBP7.08□□□□□ -1.28
VRK1-203ENST00000555067 MAPRE3Q9UPY8 281 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 NOC2LQ9Y3T9 749 aaKnown RBP7.08□□□□□ -1.28
VRK1-203ENST00000555067 CDY2AQ9Y6F7 541 aa7.08□□□□□ -1.28
VRK1-203ENST00000555067 GAGE12BA1L429 117 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 PLEKHD1A6NEE1 506 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
VRK1-203ENST00000555067 AHRRA9YTQ3 701 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 B3GALT2O43825 422 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 KRTAP10-9P60411 292 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 TRIM25Q14258 630 aaKnown RBP7.07□□□□□ -1.28
VRK1-203ENST00000555067 ATP13A4Q4VNC1 1196 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 TAF7LQ5H9L4 462 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 DRICH1Q6PGQ1 229 aaPredicted RBP7.07□□□□□ -1.28
VRK1-203ENST00000555067 SNX33Q8WV41 574 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 ZNF768Q9H5H4 540 aaKnown RBP7.07□□□□□ -1.28
VRK1-203ENST00000555067 SYNPO2LQ9H987 977 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 ADARB2Q9NS39 739 aaKnown RBP7.07□□□□□ -1.28
VRK1-203ENST00000555067 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
VRK1-203ENST00000555067 ZAR1LA6NP61 321 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 RNASET2O00584 256 aaKnown RBP7.06□□□□□ -1.28
VRK1-203ENST00000555067 PDE8AO60658 829 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 TMEM127O75204 238 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 CLEC2LP0C7M8 214 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 MGAT1P26572 445 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 ZFP36P26651 326 aaKnown RBP7.06□□□□□ -1.28
VRK1-203ENST00000555067 TAP1Q03518 808 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 XYLT1Q86Y38 959 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 PLXDC1Q8IUK5 500 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 LEO1Q8WVC0 666 aaPredicted RBP7.06□□□□□ -1.28
VRK1-203ENST00000555067 USP7Q93009 1102 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 KCTD10Q9H3F6 313 aa7.06□□□□□ -1.28
VRK1-203ENST00000555067 A0A087X0B3 334 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 GASTP01350 101 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms