RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 NCKAP1LP55160 1127 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 AMHR2Q16671 573 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 ATF7IP2Q5U623 682 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 SLFN12LQ6IEE8 588 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 ZPBP2Q6X784 338 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 ZNF720Q7Z2F6 126 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 RNF169Q8NCN4 708 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 URGCPQ8TCY9 931 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 HVCN1Q96D96 273 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 CCDC113Q9H0I3 377 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 NKX2-4Q9H2Z4 354 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 MRPL44Q9H9J2 332 aaKnown RBP11.63□□□□□ -0.55
TMEM260-206ENST00000555046 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 OLFML3Q9NRN5 406 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 HPSEQ9Y251 543 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 GIT1Q9Y2X7 761 aa11.63□□□□□ -0.55
TMEM260-206ENST00000555046 TBKBP1A7MCY6 615 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 K7ENM7 598 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 NR1I2O75469 434 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 TOM1L1O75674 476 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 ZNF202O95125 648 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 IBSPP21815 317 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 NDUFA8P51970 172 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 ERVK-21P61565 698 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 ASIC1P78348 528 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 GTF2BQ00403 316 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 PSMD2Q13200 908 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 HSP90AA2PQ14568 343 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 POSTNQ15063 836 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 SPOUT1Q5T280 376 aaKnown RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 DNAJC19Q96DA6 116 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 BICD1Q96G01 975 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 ACO2Q99798 780 aaKnown RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 GTPBP4Q9BZE4 634 aaKnown RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 TMEM206Q9H813 350 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 GDPD2Q9HCC8 539 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 TBX20Q9UMR3 447 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 YBX2Q9Y2T7 364 aaKnown RBP11.62□□□□□ -0.55
TMEM260-206ENST00000555046 PCDHB12Q9Y5F1 795 aa11.62□□□□□ -0.55
TMEM260-206ENST00000555046 ADGRA3Q8IWK6 1321 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 GVINP1Q7Z2Y8 2422 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 FRMD3A2A2Y4 597 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 LINC01553A4QN01 128 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 GOLGA6L22H0YM25 854 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 CLDN3O15551 220 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 B4GALT5O43286 388 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 MCF2P10911 925 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 MYOGP15173 224 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 BMPR1AP36894 532 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 AFMP43652 599 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 ALDH7A1P49419 539 aaKnown RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 LIG4P49917 911 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 YARSP54577 528 aaKnown RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 TAP1Q03518 808 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 LONRF3Q496Y0 759 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 UNC13DQ70J99 1090 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 TMCO2Q7Z6W1 182 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 MICALL1Q8N3F8 863 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 LRRC15Q8TF66 581 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 CLP1Q92989 425 aaKnown RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 FAM193BQ96PV7 902 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 ACCSQ96QU6 501 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 KIFC3Q9BVG8 833 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 RSAD1Q9HA92 442 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 TOPORSQ9NS56 1045 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 STK39Q9UEW8 545 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 PARP2Q9UGN5 583 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 SERTAD1Q9UHV2 236 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 IPPQ9Y573 584 aa11.61□□□□□ -0.55
TMEM260-206ENST00000555046 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 ANKRD11Q6UB99 2663 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-206ENST00000555046 VPS13AQ96RL7 3174 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 OFD1O75665 1012 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 KIF20AO95235 890 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 GCNT3O95395 438 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 NPTXRO95502 500 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 LAG3P18627 525 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 MATR3P43243 847 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 KRT17Q04695 432 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 BMS1Q14692 1282 aaKnown RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 UBXN11Q5T124 520 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 NT5DC1Q5TFE4 455 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 MPZL3Q6UWV2 235 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 CLEC17AQ6ZS10 378 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 SFR1Q86XK3 245 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 TMEM192Q8IY95 271 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 ELOA2Q8IYF1 753 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 SYCP3Q8IZU3 236 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms