RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	SYNPO2	Q9UMS6	1093 aa		5.36	□□□□□ -1.55
ATXN3-231	ENST00000554994	ADAMTS5	Q9UNA0	930 aa		5.36	□□□□□ -1.55
ATXN3-231	ENST00000554994	SNX14	Q9Y5W7	946 aa		5.36	□□□□□ -1.55
ATXN3-231	ENST00000554994	CYP46A1	Q9Y6A2	500 aa		5.36	□□□□□ -1.55
ATXN3-231	ENST00000554994	NCAN	O14594	1321 aa		5.36	□□□□□ -1.55
ATXN3-231	ENST00000554994	PLIN4	Q96Q06	1357 aa		5.36	□□□□□ -1.55
ATXN3-231	ENST00000554994	ZNF236	Q9UL36	1845 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ELP1	O95163	1332 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	KLF18	A0A0U1RQI7	1052 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	METTL12	A8MUP2	240 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	EREG	O14944	169 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ZBTB43	O43298	467 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	MBTPS2	O43462	519 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PLA2G6	O60733	806 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CFB	P00751	764 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ICAM1	P05362	532 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	HMGB1	P09429	215 aa	Known RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CALM1	P0DP23	149 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CALM2	P0DP24	149 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CALM3	P0DP25	149 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	MYCL	P12524	364 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PCSK2	P16519	638 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	HSPA4	P34932	840 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	LTBR	P36941	435 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	BUD31	P41223	144 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CHMP4BP1	P59074	171 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CCT2	P78371	535 aa	Known RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	DLX2	Q07687	328 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	STK3	Q13188	491 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	BAAT	Q14032	418 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	GRM4	Q14833	912 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	QRICH1	Q2TAL8	776 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	TKFC	Q3LXA3	575 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CYP27C1	Q4G0S4	372 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	MCTP2	Q6DN12	878 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	RNF207	Q6ZRF8	634 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	MICU3	Q86XE3	530 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	DCLK2	Q8N568	766 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	FANCB	Q8NB91	859 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	NETO1	Q8TDF5	533 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	TBC1D5	Q92609	795 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PMEPA1	Q969W9	287 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PABPC5	Q96DU9	382 aa	Known RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	RRP36	Q96EU6	259 aa	Known RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PIGS	Q96S52	555 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	C17orf80	Q9BSJ5	609 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	JMJD4	Q9H9V9	463 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	LY9	Q9HBG7	655 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PDRG1	Q9NUG6	133 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	SEC63	Q9UGP8	760 aa	Known RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	MAD2L2	Q9UI95	211 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ZNF214	Q9UL59	606 aa	Predicted RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	ZMIZ1	Q9ULJ6	1067 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	CNPY2	Q9Y2B0	182 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	MRPL11	Q9Y3B7	192 aa	Known RBP	5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	PCDHA1	Q9Y5I3	950 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	SCN5A	Q14524	2016 aa		5.35	□□□□□ -1.55
ATXN3-231	ENST00000554994	LINC01553	A4QN01	128 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	GOLGA8A	A7E2F4	631 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	GOLGA8B	A8MQT2	603 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994		B4DLN1	442 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	SH2B2	O14492	632 aa	Predicted RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	ADCY6	O43306	1168 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	B4GALT4	O60513	344 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	EIF5B	O60841	1220 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	RPLP1	P05386	114 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	FAM87A	P0C7U9	286 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	AR	P10275	920 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	CYP2C9	P11712	490 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	ACTN1	P12814	892 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	RPS6KB1	P23443	525 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	HOXA13	P31271	388 aa	Predicted RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	NT5C2	P49902	561 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	GNAQ	P50148	359 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	MRPL12	P52815	198 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	OAZ1	P54368	228 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	ERVK-21	P61565	698 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	BEX3	Q00994	111 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	EXOSC10	Q01780	885 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	AKAP17A	Q02040	695 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	POU4F3	Q15319	338 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	TIGD5	Q53EQ6	642 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	ARHGEF16	Q5VV41	709 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	CXCL17	Q6UXB2	119 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	BTNL9	Q6UXG8	535 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	RUFY3	Q7L099	469 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	MCF2L2	Q86YR7	1114 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	ABRA	Q8N0Z2	381 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	REPS2	Q8NFH8	660 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	STK32A	Q8WU08	396 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	BRF1	Q92994	677 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	CUL5	Q93034	780 aa		5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	TGS1	Q96RS0	853 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	MPHOSPH6	Q99547	160 aa	Known RBP	5.34	□□□□□ -1.55
ATXN3-231	ENST00000554994	TINF2	Q9BSI4	451 aa		5.34	□□□□□ -1.55

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