RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ACO2Q99798 780 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ERAP1Q9NZ08 941 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 BZW2Q9Y6E2 419 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 CAPN6Q9Y6Q1 641 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 DDX3XO00571 662 aaKnown RBP eCLIP9.66□□□□□ -0.865e-8■■□□□ 12.6
TDP1-210ENST00000554976 KIF5CO60282 957 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 EVI5O60447 810 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 TADA3O75528 432 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 KRT13P13646 458 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 TM4SF4P48230 202 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 MCL1Q07820 350 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 GRM1Q13255 1194 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 MXD4Q14582 209 aaPredicted RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 NAA30Q147X3 362 aaPredicted RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 DRAP1Q14919 205 aaPredicted RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 FAM187BQ17R55 369 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 WDR78Q5VTH9 848 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 IQSEC1Q6DN90 963 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 RSRC2Q7L4I2 434 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 IFIH1Q9BYX4 1025 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 ABHD16BQ9H3Z7 469 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 MYH10P35580 1976 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 NOP56O00567 594 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 HNRNPDLO14979 420 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 GFPT2O94808 682 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 VNN1O95497 513 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 ARHGAP29Q52LW3 1261 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 CCDC122Q5T0U0 273 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 AFG1LQ8WV93 481 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 POMGNT1Q8WZA1 660 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 PACSIN1Q9BY11 444 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 KIAA1586Q9HCI6 787 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ZNF286BP0CG31 522 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 FERP16591 822 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 KLHL30Q0D2K2 578 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 NAB2Q15742 525 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 KRT39Q6A163 491 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 SCARA3Q6AZY7 606 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 FAM71AQ8IYT1 594 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 LRRC71Q8N4P6 559 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 UBR7Q8N806 425 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 DEPTORQ8TB45 409 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 GLG1Q92896 1179 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 TARS2Q9BW92 718 aaKnown RBP9.65□□□□□ -0.86
TDP1-210ENST00000554976 MINDY3Q9H8M7 445 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 NOCTQ9UK39 431 aaKnown RBP9.65□□□□□ -0.86
TDP1-210ENST00000554976 GUCA1BQ9UMX6 200 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 SCN10AQ9Y5Y9 1956 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 LRRIQ4A6NIV6 560 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 A6NJR5 290 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 KIF3CO14782 793 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 KRT86O43790 486 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 PPFIA4O75335 1185 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 ATP1A1P05023 1023 aaKnown RBP9.65□□□□□ -0.86
TDP1-210ENST00000554976 GJB1P08034 283 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 INSRRP14616 1297 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 HOXC8P31273 242 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 STAT1P42224 750 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 MXI1P50539 228 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 EFNA5P52803 228 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 PTENP60484 403 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 ADAM17P78536 824 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 HIC1Q14526 733 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 SLFN12LQ6IEE8 588 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 SHC3Q92529 594 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 KAT2BQ92831 832 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 KAT5Q92993 513 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 FAM213AQ9BRX8 229 aa9.65□□□□□ -0.86
TDP1-210ENST00000554976 AGO2Q9UKV8 859 aaKnown RBP9.65□□□□□ -0.86
TDP1-210ENST00000554976 ANO9A1A5B4 782 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 K7ERI5 159 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 HAS3O00219 553 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 FOXN3O00409 490 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 CHRNB2P17787 502 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 LIG4P49917 911 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 INHBEP58166 350 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 TCEAL1Q15170 157 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CCL14Q16627 93 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 ZACNQ401N2 412 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 C10orf76Q5T2E6 689 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 TDRD10Q5VZ19 366 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 MTHFD1LQ6UB35 978 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 ZNF572Q7Z3I7 529 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 ZIC5Q96T25 663 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CGRRF1Q99675 332 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 NAPGQ99747 312 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 SUCLA2Q9P2R7 463 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 CPSF3Q9UKF6 684 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 PCDHGC5Q9Y5F6 944 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 IVNS1ABPQ9Y6Y0 642 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 NCANO14594 1321 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 ZC3H11AO75152 810 aaKnown RBP eCLIP9.64□□□□□ -0.87
TDP1-210ENST00000554976 TFRCP02786 760 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 NKX3-2P78367 333 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms