RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 KSR1Q8IVT5 923 aa18.94■□□□□ 0.62
SHOX-204ENST00000554971 DAW1Q8N136 415 aa18.94■□□□□ 0.62
SHOX-204ENST00000554971 MSANTD4Q8NCY6 345 aa18.94■□□□□ 0.62
SHOX-204ENST00000554971 CDHR5Q9HBB8 845 aa18.94■□□□□ 0.62
SHOX-204ENST00000554971 ATP6V0A4Q9HBG4 840 aa18.94■□□□□ 0.62
SHOX-204ENST00000554971 CHD7Q9P2D1 2997 aa18.94■□□□□ 0.62
SHOX-204ENST00000554971 NPHP3-ACAD11A0A0J9YXS1 232 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 TIMP1P01033 207 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 SSBP05455 408 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHOX-204ENST00000554971 RAD51AP2Q09MP3 1159 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 VWA3BQ502W6 1294 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 SCLYQ96I15 445 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 ZNF668Q96K58 619 aaPredicted RBP18.93■□□□□ 0.62
SHOX-204ENST00000554971 PPP1R16BQ96T49 567 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 TSGA10Q9BZW7 698 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 RAB21Q9UL25 225 aa18.93■□□□□ 0.62
SHOX-204ENST00000554971 CTAGE15A4D2H0 777 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 GPR32O75388 356 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 CTAGE8P0CG41 777 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 CCL23P55773 120 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 MAPK7Q13164 816 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 CTAGE6Q86UF2 777 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 CTAGE4Q8IX94 777 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 PRPF31Q8WWY3 499 aaKnown RBP18.92■□□□□ 0.62
SHOX-204ENST00000554971 RPGRIP1Q96KN7 1286 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 AKT3Q9Y243 479 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 REXO2Q9Y3B8 237 aaKnown RBP18.92■□□□□ 0.62
SHOX-204ENST00000554971 TRIOBPQ9H2D6 2365 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 ERLIN1O75477 346 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 TMOD1P28289 359 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 ARL2P36404 184 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 AMPD2Q01433 879 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 BFSP2Q13515 415 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 KIZQ2M2Z5 673 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 TXLNBQ8N3L3 684 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 TMEM40Q8WWA1 233 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 DDX12PQ92771 950 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 SLC39A2Q9NP94 309 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 SUCLA2Q9P2R7 463 aaPredicted RBP18.92■□□□□ 0.62
SHOX-204ENST00000554971 MYO6Q9UM54 1294 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 PLAGL2Q9UPG8 496 aa18.92■□□□□ 0.62
SHOX-204ENST00000554971 GAS2O43903 313 aaKnown RBP18.91■□□□□ 0.62
SHOX-204ENST00000554971 GNA14O95837 355 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 IQCF3P0C7M6 154 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 RAG1P15918 1043 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 SELPP16109 830 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 MRPS6P82932 125 aaKnown RBP18.91■□□□□ 0.62
SHOX-204ENST00000554971 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
SHOX-204ENST00000554971 FAM26DQ5JW98 314 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 GPBP1Q86WP2 473 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 RHPN2Q8IUC4 686 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 NME8Q8N427 588 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 MCPH1Q8NEM0 835 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 ASAP3Q8TDY4 903 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 BSNDQ8WZ55 320 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 JPH2Q9BR39 696 aaPredicted RBP18.91■□□□□ 0.62
SHOX-204ENST00000554971 GBP3Q9H0R5 595 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 ADAMTS10Q9H324 1103 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 NDST4Q9H3R1 872 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 CDY2AQ9Y6F7 541 aa18.91■□□□□ 0.62
SHOX-204ENST00000554971 ANO9A1A5B4 782 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 RSPH10B2B2RC85 870 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 CAND2O75155 1236 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 RSPH10BP0C881 870 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 GLRA2P23416 452 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 GUCY2CP25092 1073 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 GPC3P51654 580 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 NLRP11P59045 1033 aaKnown RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 TERF2Q15554 542 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 PAPD7Q5XG87 772 aaKnown RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 EXOC8Q8IYI6 725 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 MYOCDQ8IZQ8 938 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 CEP63Q96MT8 703 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 REEP2Q9BRK0 252 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 NUCKS1Q9H1E3 243 aaKnown RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 NHEJ1Q9H9Q4 299 aaPredicted RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 COL4A3BPQ9Y5P4 624 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 NBNO60934 754 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 FKBP3Q00688 224 aaKnown RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 LAMTOR4Q0VGL1 99 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 CCDC122Q5T0U0 273 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 FAM102BQ5T8I3 360 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 IER5Q5VY09 327 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 MFSD5Q6N075 450 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 KIAA1328Q86T90 577 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 CCDC65Q8IXS2 484 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 PSPC1Q8WXF1 523 aaKnown RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 BADQ92934 168 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 PCMTD1Q96MG8 357 aaPredicted RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 POLR3FQ9H1D9 316 aaPredicted RBP18.9■□□□□ 0.62
SHOX-204ENST00000554971 IFT122Q9HBG6 1241 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 AGPAT5Q9NUQ2 364 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 KCND2Q9NZV8 630 aa18.9■□□□□ 0.62
SHOX-204ENST00000554971 A0A0U1RQJ8 604 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 HIP1RO75146 1068 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 MLLT1Q03111 559 aaPredicted RBP18.89■□□□□ 0.61
SHOX-204ENST00000554971 TRAPPC11Q7Z392 1133 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 RSPH3Q86UC2 560 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms