RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 USP28Q96RU2 1077 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 TIPINQ9BVW5 301 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 CCDC113Q9H0I3 377 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 ZHX3Q9H4I2 956 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 FAN1Q9Y2M0 1017 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 PRG3Q9Y2Y8 225 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 ANK1P16157 1881 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 PLXNA3P51805 1871 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 MYO10Q9HD67 2058 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 B4GALT3O60512 393 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 NR1I2O75469 434 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 FAM13AO94988 1023 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 ALDH2P05091 517 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 EDN1P05305 212 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 SLC12A3P55017 1021 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 MAPK7Q13164 816 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 MCM6Q14566 821 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 SMC1AQ14683 1233 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 LEXMQ3ZCV2 418 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 NT5DC1Q5TFE4 455 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 LLGL2Q6P1M3 1020 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 TMEM173Q86WV6 379 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 LARP4BQ92615 738 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 RAD54LQ92698 747 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 IGSF21Q96ID5 467 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 TCHPQ9BT92 498 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 MRPL4Q9BYD3 311 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 NGRNQ9NPE2 291 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 SNTG2Q9NY99 539 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 TFIP11Q9UBB9 837 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 FAM50BQ9Y247 325 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 GDAQ9Y2T3 454 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
SHMT2-213ENST00000554600 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
SHMT2-213ENST00000554600 VWA8A3KMH1 1905 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 HIDE1A8MVS5 230 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 FSCN2O14926 492 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 RECQL4O94761 1208 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 CXCL14O95715 111 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 HARSP12081 509 aaKnown RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 PLS3P13797 630 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 MATR3P43243 847 aaKnown RBP eCLIP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 STRN3Q13033 797 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 ADAM15Q13444 863 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 SLC39A14Q15043 492 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 DCAF4L1Q3SXM0 396 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 RRAGBQ5VZM2 374 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 USP49Q70CQ1 688 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 EFHBQ8N7U6 833 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 KRI1Q8N9T8 703 aaKnown RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 AUTS2Q8WXX7 1259 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 REEP2Q9BRK0 252 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 TMEM175Q9BSA9 504 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 TARS2Q9BW92 718 aaKnown RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 C17orf75Q9HAS0 396 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 BLOC1S4Q9NUP1 217 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 MIOSQ9NXC5 875 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 LARSQ9P2J5 1176 aaKnown RBP11.72□□□□□ -0.53
SHMT2-213ENST00000554600 RAPGEFL1Q9UHV5 662 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 KCNG1Q9UIX4 513 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
SHMT2-213ENST00000554600 C2orf16Q68DN1 1984 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 NRP1O14786 923 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 TBX10O75333 385 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 SRGAP2BP0DMP2 458 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 ZSCAN22P10073 491 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 IL9P15248 144 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 LTBRP36941 435 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 OSTNP61366 133 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 RBM10P98175 930 aaKnown RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 GRIK3Q13003 919 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 DUSP6Q16828 381 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 CTC1Q2NKJ3 1217 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 ARSHQ5FYA8 562 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 BICD1Q96G01 975 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 CDCA3Q99618 268 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 ACO2Q99798 780 aaKnown RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 PANK2Q9BZ23 570 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 ARHGAP28Q9P2N2 729 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 ANKFY1Q9P2R3 1169 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms