RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TOMM22Q9NS69 142 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 TMEM260Q9NX78 707 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 KCNK4Q9NYG8 393 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 MAP3K20Q9NYL2 800 aaKnown RBP7.93□□□□□ -1.14
ATXN3-224ENST00000554040 SEPT3Q9UH03 358 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 CDH22Q9UJ99 828 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 ZNF215Q9UL58 517 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-224ENST00000554040 LZTS1Q9Y250 596 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 PPME1Q9Y570 386 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 CDY2AQ9Y6F7 541 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 CCDC171Q6TFL3 1326 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
ATXN3-224ENST00000554040 HIDE1A8MVS5 230 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 SCG2P13521 617 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 CCND2P30279 289 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 GATMP50440 423 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 PLCB3Q01970 1234 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 HYAL2Q12891 473 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 ST3GAL2Q16842 350 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 UTP14CQ5TAP6 766 aaKnown RBP7.92□□□□□ -1.14
ATXN3-224ENST00000554040 PLPP4Q5VZY2 271 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 CYFIP1Q7L576 1253 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 THNSL1Q8IYQ7 743 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 CACTIN-AS1Q8N1I8 211 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 SAMD3Q8N6K7 520 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 TDRD5Q8NAT2 981 aaKnown RBP7.92□□□□□ -1.14
ATXN3-224ENST00000554040 IL31RAQ8NI17 732 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 DNAJB3Q8WWF6 145 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 RUBCNQ92622 972 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 CASP10Q92851 521 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 UBL7Q96S82 380 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-224ENST00000554040 VAT1LQ9HCJ6 419 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 NGRNQ9NPE2 291 aaKnown RBP7.92□□□□□ -1.14
ATXN3-224ENST00000554040 FAM13BQ9NYF5 915 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 PUF60Q9UHX1 559 aaKnown RBP7.92□□□□□ -1.14
ATXN3-224ENST00000554040 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 SQORQ9Y6N5 450 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 R4GN57 208 aa7.92□□□□□ -1.14
ATXN3-224ENST00000554040 MBLAC1A4D2B0 266 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-224ENST00000554040 LINC01387J3KSC0 135 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 FGAP02671 866 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 FSTP19883 344 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 SDHBP21912 280 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 MTHFRP42898 656 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 SARSP49591 514 aaKnown RBP7.91□□□□□ -1.14
ATXN3-224ENST00000554040 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
ATXN3-224ENST00000554040 APOBRQ0VD83 1088 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 PPFIA1Q13136 1202 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 TXNDC11Q6PKC3 985 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 DGKHQ86XP1 1220 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 DCLK2Q8N568 766 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 CEP120Q8N960 986 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 COLGALT1Q8NBJ5 622 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 MRPS27Q92552 414 aaKnown RBP7.91□□□□□ -1.14
ATXN3-224ENST00000554040 TCF25Q9BQ70 676 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 AMNQ9BXJ7 453 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 MUC3BQ9H195 1237 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 JMJD4Q9H9V9 463 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 TYW1Q9NV66 732 aaKnown RBP7.91□□□□□ -1.14
ATXN3-224ENST00000554040 TMEM63CQ9P1W3 806 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 PADI3Q9ULW8 664 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 TELO2Q9Y4R8 837 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 PCDHB7Q9Y5E2 793 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 MYH7P12883 1935 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 FAM208BQ5VWN6 2430 aa7.91□□□□□ -1.14
ATXN3-224ENST00000554040 MYH7BA7E2Y1 1941 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 TBKBP1A7MCY6 615 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 EOMESO95936 686 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 RPLP2P05387 115 aaKnown RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 HOXA13P31271 388 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 ATXN1P54253 815 aaKnown RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 TDGQ13569 410 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 GNPTABQ3T906 1256 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 ATAT1Q5SQI0 421 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 MARCH8Q5T0T0 291 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 FAM102BQ5T8I3 360 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 KIAA0319Q5VV43 1072 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 FAM43BQ6ZT52 329 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 ATCAYQ86WG3 371 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 INPP4AQ96PE3 977 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 SENP7Q9BQF6 1050 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 TMX1Q9H3N1 280 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 CWH43Q9H720 699 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 ERVK-5Q9HDB9 667 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 ENTPD7Q9NQZ7 604 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 CYP26B1Q9NR63 512 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 ABI2Q9NYB9 513 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 TUBE1Q9UJT0 475 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 DBR1Q9UK59 544 aaKnown RBP7.9□□□□□ -1.14
ATXN3-224ENST00000554040 FBXL21Q9UKT6 434 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 DDX19BQ9UMR2 479 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 PCDHA1Q9Y5I3 950 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 HCFC2Q9Y5Z7 792 aa7.9□□□□□ -1.14
ATXN3-224ENST00000554040 KIAA1217Q5T5P2 1943 aa7.9□□□□□ -1.15
ATXN3-224ENST00000554040 USP24Q9UPU5 2620 aa7.89□□□□□ -1.15
ATXN3-224ENST00000554040 IGSF9BQ9UPX0 1349 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms