RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 OXSMQ9NWU1 459 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 PTCH2Q9Y6C5 1203 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 ARHGEF17Q96PE2 2063 aaPredicted RBP3.58□□□□□ -1.84
SRP54-204ENST00000553923 MGST3O14880 152 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 CFIP05156 583 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 ELANEP08246 267 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 RBP3P10745 1247 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 APBA1Q02410 837 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 RBL2Q08999 1139 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 BMT2Q1RMZ1 405 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 FNDC3BQ53EP0 1204 aaKnown RBP3.57□□□□□ -1.84
SRP54-204ENST00000553923 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 GPR149Q86SP6 731 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 ZZZ3Q8IYH5 903 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 SH2D3CQ8N5H7 860 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
SRP54-204ENST00000553923 ORAI3Q9BRQ5 295 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 KRTAP1-5Q9BYS1 174 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 CABP5Q9NP86 173 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 FOXJ2Q9P0K8 574 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 H2AFY2Q9P0M6 372 aaPredicted RBP3.57□□□□□ -1.84
SRP54-204ENST00000553923 RNF7Q9UBF6 113 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 TMPRSS11EQ9UL52 423 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 FPGT-TNNI3KV9GXZ4 949 aa3.57□□□□□ -1.84
SRP54-204ENST00000553923 LRRC3CA6NJW4 275 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 ITGAMP11215 1152 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 ATP2A2P16615 1042 aaKnown RBP3.56□□□□□ -1.84
SRP54-204ENST00000553923 GPR15P49685 360 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 RBM25P49756 843 aaKnown RBP3.56□□□□□ -1.84
SRP54-204ENST00000553923 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
SRP54-204ENST00000553923 LRRC32Q14392 662 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 UBE3CQ15386 1083 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 C2orf27AQ580R0 203 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 PIK3R6Q5UE93 754 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 LYSMD2Q8IV50 215 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 SLC41A1Q8IVJ1 513 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 LILRB2Q8N423 598 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 ZNF496Q96IT1 587 aaPredicted RBP3.56□□□□□ -1.84
SRP54-204ENST00000553923 DUSP26Q9BV47 211 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 TOMM22Q9NS69 142 aa3.56□□□□□ -1.84
SRP54-204ENST00000553923 USP15Q9Y4E8 981 aaPredicted RBP3.56□□□□□ -1.84
SRP54-204ENST00000553923 B5MCH6 92 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 HLA-DOAP06340 250 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 CLEC2LP0C7M8 214 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 SPATA31D3P0C874 917 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 SDSP20132 328 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 MGAT1P26572 445 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 CCDC178Q5BJE1 867 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 AGAP9Q5VTM2 703 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 B3GNTL1Q67FW5 361 aaPredicted RBP3.55□□□□□ -1.84
SRP54-204ENST00000553923 CDCA2Q69YH5 1023 aaPredicted RBP3.55□□□□□ -1.84
SRP54-204ENST00000553923 EFCAB12Q6NXP0 572 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 SPATA31D4Q6ZUB0 917 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 SLC44A3Q8N4M1 653 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 ZNF384Q8TF68 577 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 GAB3Q8WWW8 586 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 MKL1Q969V6 931 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 CEP95Q96GE4 821 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 PDLIM2Q96JY6 352 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 Q96MF0 132 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 USP18Q9UMW8 372 aa3.55□□□□□ -1.84
SRP54-204ENST00000553923 WIPF3A6NGB9 483 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 DRGXA6NNA5 263 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 TGM5O43548 720 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 OPA1O60313 960 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 PROP1O75360 226 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 CDKL5O76039 1030 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 FDXRP22570 491 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 CD40P25942 277 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 CTGFP29279 349 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 CACNA2D1P54289 1103 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 MGAT5Q09328 741 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 MAPK7Q13164 816 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 DDB1Q16531 1140 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 C19orf54Q5BKX5 351 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 ARMC6Q6NXE6 501 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 ABHD15Q6UXT9 468 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 Q6ZNX1 250 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 TMEM132CQ8N3T6 1108 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 RNF169Q8NCN4 708 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 SMG7Q92540 1137 aaKnown RBP3.54□□□□□ -1.84
SRP54-204ENST00000553923 TFAP2CQ92754 450 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 ZNF778Q96MU6 729 aa3.54□□□□□ -1.84
SRP54-204ENST00000553923 PRSS38A1L453 326 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 TMEM127O75204 238 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 FOSP01100 380 aaPredicted RBP3.53□□□□□ -1.84
SRP54-204ENST00000553923 LTA4HP09960 611 aaKnown RBP3.53□□□□□ -1.84
SRP54-204ENST00000553923 JMJD7P0C870 316 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 ATP2B1P20020 1258 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 ABCG1P45844 678 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 NAALADL2Q58DX5 795 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 MFSD14BQ5SR56 506 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 ESPNLQ6ZVH7 1005 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 RHOT2Q8IXI1 618 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 ZNF428Q96B54 188 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 TMEM74BQ9NUR3 256 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 KLHL11Q9NVR0 708 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 RNF181Q9P0P0 153 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 POGKQ9P215 609 aa3.53□□□□□ -1.84
SRP54-204ENST00000553923 EVLQ9UI08 416 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms