RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TNFSF13BQ9Y275 285 aa10.66□□□□□ -0.7
CHD8-204ENST00000553622 BRCA2P51587 3418 aa10.66□□□□□ -0.7
CHD8-204ENST00000553622 A0A0B4J269 797 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 TPM2P07951 284 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 ATP1A3P13637 1013 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 KRT13P13646 458 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
CHD8-204ENST00000553622 ZSCAN20P17040 1043 aaPredicted RBP10.65□□□□□ -0.7
CHD8-204ENST00000553622 ADSSP30520 456 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 AXLP30530 894 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
CHD8-204ENST00000553622 ACOT2P49753 483 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 PCBP1Q15365 356 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHD8-204ENST00000553622 DCAF17Q5H9S7 520 aaPredicted RBP10.65□□□□□ -0.7
CHD8-204ENST00000553622 DEFB128Q7Z7B8 93 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 TNS4Q8IZW8 715 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 GPD1LQ8N335 351 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 ZSWIM2Q8NEG5 633 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 KCNN1Q92952 543 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 FAM212AQ96EL1 285 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 SCLYQ96I15 445 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 APOL6Q9BWW8 343 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 HAPLN2Q9GZV7 340 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 CDT1Q9H211 546 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 ERVK-5Q9HDB9 667 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 TAB2Q9NYJ8 693 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 PADI3Q9ULW8 664 aa10.65□□□□□ -0.7
CHD8-204ENST00000553622 A0A1B0GUA9 196 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 KIAA0391O15091 583 aaKnown RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 OGTO15294 1046 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 SLC16A3O15427 465 aaKnown RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 EXTL3O43909 919 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 AKAP3O75969 853 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 GNA14O95837 355 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 MCF2P10911 925 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 RAG1P15918 1043 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 SPAG1Q07617 926 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 MCL1Q07820 350 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 RBL2Q08999 1139 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 MYBPC2Q14324 1141 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 HSP90AA2PQ14568 343 aaPredicted RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 MBTPS1Q14703 1052 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 NFIL3Q16649 462 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 UVSSAQ2YD98 709 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 DCAF4L1Q3SXM0 396 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 TCP11X2Q5H9J9 407 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 ZBTB41Q5SVQ8 909 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 CDKAL1Q5VV42 579 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 TCERG1LQ5VWI1 586 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 FOXR2Q6PJQ5 311 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 TRAF7Q6Q0C0 670 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 FILIP1Q7Z7B0 1213 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 CBWD2Q8IUF1 395 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 SLC9A9Q8IVB4 645 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 C12orf56Q8IXR9 622 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 USP38Q8NB14 1042 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 CCDC127Q96BQ5 260 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 EIF2AQ9BY44 585 aaKnown RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 IFIH1Q9BYX4 1025 aaKnown RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 HSD3B7Q9H2F3 369 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 MMRN2Q9H8L6 949 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 DMAC2Q9NW81 257 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 PRKAG2Q9UGJ0 569 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 ARMCX3Q9UH62 379 aaPredicted RBP10.64□□□□□ -0.71
CHD8-204ENST00000553622 TBX21Q9UL17 535 aa10.64□□□□□ -0.71
CHD8-204ENST00000553622 LTBP2Q14767 1821 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 FSD2A1L4K1 749 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 NBNO60934 754 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 LDHAP00338 332 aaKnown RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 ADRB2P07550 413 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 ZNF18P17022 549 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 PROZP22891 400 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 EEF1GP26641 437 aaKnown RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 HOXA11P31270 313 aaPredicted RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 TNFSF9P41273 254 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 MRE11P49959 708 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 FANCCQ00597 558 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 KRT31Q15323 416 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 UBE2Q1Q7Z7E8 422 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 IRF2BP1Q8IU81 584 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 ZC3H3Q8IXZ2 948 aaKnown RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 CEP120Q8N960 986 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 SEPT8Q92599 483 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 CCDC51Q96ER9 411 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 ADAM2Q99965 735 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 TUBGCP2Q9BSJ2 902 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 MKNK1Q9BUB5 465 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 TRIM5Q9C035 493 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 WNT8AQ9H1J5 351 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 VPS16Q9H269 839 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 RPF1Q9H9Y2 349 aaKnown RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 METTL14Q9HCE5 456 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms