RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 RELL1Q8IUW5 271 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 GLYCTKQ8IVS8 523 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CFAP61Q8NHU2 1237 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 LMO3Q8TAP4 145 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 EPS8L1Q8TE68 723 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CD101Q93033 1021 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ZKSCAN4Q969J2 545 aaPredicted RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 HVCN1Q96D96 273 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 FAM81BQ96LP2 452 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ANKRD27Q96NW4 1050 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 SERPINB12Q96P63 405 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 RIT2Q99578 217 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 EIF2AK1Q9BQI3 630 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ZSWIM1Q9BR11 485 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 RUSC1Q9BVN2 902 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 FOXP3Q9BZS1 431 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 BHMT2Q9H2M3 363 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ADAM7Q9H2U9 754 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 TMEM206Q9H813 350 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 DNAJC18Q9H819 358 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PPANQ9NQ55 473 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 HOMER3Q9NSC5 361 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 WHRNQ9P202 907 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 UVRAGQ9P2Y5 699 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PI4KBQ9UBF8 816 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CNOT8Q9UFF9 292 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 DNAJC12Q9UKB3 198 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 GTF3C4Q9UKN8 822 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 MTUS1Q9ULD2 1270 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 NOVA2Q9UNW9 492 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ACTL7BQ9Y614 415 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 SLX4Q8IY92 1834 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 RPTORQ8N122 1335 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PASKQ96RG2 1323 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 IGSF9BQ9UPX0 1349 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ANKRD31Q8N7Z5 1873 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ADAMTSL1Q8N6G6 1762 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CCT8L1PA6NM43 557 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 FAM86B1E9PN63 330 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 DNM1LO00429 736 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PPEF1O14829 653 aaPredicted RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 OPLAHO14841 1288 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 RGS16O15492 202 aaPredicted RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 RIPK2O43353 540 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 HRO43593 1189 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CTNND1O60716 968 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 ENTPD3O75355 529 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 LYPLA2O95372 231 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CYP1A2P05177 515 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 FAM86B2P0C5J1 330 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 EEF2P13639 858 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 GYS1P13807 737 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 EZRP15311 586 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 TNFAIP3P21580 790 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC16A2P36021 539 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 FLT3P36888 993 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 STAT3P40763 770 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CASP4P49662 377 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PEX5P50542 639 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 DNA2P51530 1060 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PRELPP51888 382 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC8A3P57103 927 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PSMC6P62333 389 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 GHRHRQ02643 423 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 ICA1Q05084 483 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CCDC15Q0P6D6 951 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PTP4A2Q12974 167 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 EPC2Q52LR7 807 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 ODF2Q5BJF6 829 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 SPDYAQ5MJ70 313 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 SEL1L2Q5TEA6 688 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 APOBEC3HQ6NTF7 200 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PPP1R2P3Q6NXS1 205 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 LYPD8Q6UX82 237 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 KCTD1Q719H9 257 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 OTOP1Q7RTM1 612 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CPLX4Q7Z7G2 160 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 AMIGO3Q86WK7 504 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 DDX42Q86XP3 938 aaKnown RBP eCLIP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 SPNS2Q8IVW8 549 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 FAM178BQ8IXR5 827 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 LARGE2Q8N3Y3 721 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 RIBC1Q8N443 379 aaPredicted RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 CERS5Q8N5B7 392 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 SAMD3Q8N6K7 520 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PRELID2Q8N945 189 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 OR2W6PQ8NHA6 318 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 ADAMTS19Q8TE59 1207 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 DHX38Q92620 1227 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 ALG3Q92685 438 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 ART4Q93070 314 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 PBXIP1Q96AQ6 731 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 HOOK2Q96ED9 719 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 NACC1Q96RE7 527 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 IWS1Q96ST2 819 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 P2RX7Q99572 595 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 AGPAT1Q99943 283 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 USB1Q9BQ65 265 aaKnown RBP5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 HINFPQ9BQA5 517 aa5.65□□□□□ -1.5
TMEM55B-204ENST00000553602 TRIM51Q9BSJ1 452 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms