RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 FAN1Q9Y2M0 1017 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 GDAQ9Y2T3 454 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 KIF3AQ9Y496 699 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.12■□□□□ 0.81
SHMT2-206ENST00000553529 CLIC4Q9Y696 253 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 BDP1A6H8Y1 2624 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 CASTOR2A6NHX0 329 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 CCDC169A6NNP5 214 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 INPPL1O15357 1258 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 RECQL4O94761 1208 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 COL9A1P20849 921 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 NPTX2P47972 431 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 FAM187BQ17R55 369 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 TMEM132AQ24JP5 1023 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 GLRA4Q5JXX5 417 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 USP49Q70CQ1 688 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 SUSD6Q92537 303 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 CCDC51Q96ER9 411 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 RPGRIP1Q96KN7 1286 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 LRFN3Q9BTN0 628 aa20.11■□□□□ 0.81
SHMT2-206ENST00000553529 LAD1O00515 517 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 ACKR2O00590 384 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 SLC16A4O15374 487 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 MEFVO15553 781 aaPredicted RBP20.1■□□□□ 0.81
SHMT2-206ENST00000553529 EFEMP2O95967 443 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
SHMT2-206ENST00000553529 MAPK6Q16659 721 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 TMEM119Q4V9L6 283 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 PDE12Q6L8Q7 609 aaKnown RBP20.1■□□□□ 0.81
SHMT2-206ENST00000553529 TMEM184AQ6ZMB5 413 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 SLC22A17Q8WUG5 538 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 CDCA3Q99618 268 aaPredicted RBP20.1■□□□□ 0.81
SHMT2-206ENST00000553529 TMEM175Q9BSA9 504 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 GPR62Q9BZJ7 368 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 DNM3Q9UQ16 869 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 GIT1Q9Y2X7 761 aa20.1■□□□□ 0.81
SHMT2-206ENST00000553529 LILRB3O75022 631 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 ALDH2P05091 517 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 CNPP09543 421 aaKnown RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 MUTP22033 750 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 SLC12A3P55017 1021 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 OSTNP61366 133 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 CEBPZQ03701 1054 aaKnown RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 RESTQ13127 1097 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 DHX8Q14562 1220 aaKnown RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 KARSQ15046 597 aaKnown RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 NAB2Q15742 525 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 SEZ6Q53EL9 994 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 ARSHQ5FYA8 562 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 HYIQ5T013 277 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 RARS2Q5T160 578 aaKnown RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 ZBTB33Q86T24 672 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 CABP7Q86V35 215 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 RNF135Q8IUD6 432 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 GLYCTKQ8IVS8 523 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 RNF168Q8IYW5 571 aaPredicted RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 CNNM3Q8NE01 707 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 ZBTB45Q96K62 511 aaPredicted RBP20.09■□□□□ 0.81
SHMT2-206ENST00000553529 KLHL5Q96PQ7 755 aa20.09■□□□□ 0.81
SHMT2-206ENST00000553529 TRIP11Q15643 1979 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 N4BP3O15049 544 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 RPL17P18621 184 aaKnown RBP20.08■□□□□ 0.81
SHMT2-206ENST00000553529 SYT1P21579 422 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 NCBP1Q09161 790 aaKnown RBP20.08■□□□□ 0.81
SHMT2-206ENST00000553529 PCBP1Q15365 356 aaKnown RBP eCLIP20.08■□□□□ 0.81
SHMT2-206ENST00000553529 ATF7IP2Q5U623 682 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 IFT74Q96LB3 600 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 PRIMPOLQ96LW4 560 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 TARS2Q9BW92 718 aaKnown RBP20.08■□□□□ 0.81
SHMT2-206ENST00000553529 RAB34Q9BZG1 259 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 C2orf40Q9H1Z8 148 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 POMKQ9H5K3 350 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 GOLGA2P5Q9HBQ8 144 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 KANSL3Q9P2N6 904 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 PRKAG3Q9UGI9 489 aa20.08■□□□□ 0.81
SHMT2-206ENST00000553529 NCOR1O75376 2440 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 C2orf16Q68DN1 1984 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 KIF4AO95239 1232 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 PLA2G4BP0C869 781 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 SPATA31D3P0C874 917 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 HARSP12081 509 aaKnown RBP20.07■□□□□ 0.8
SHMT2-206ENST00000553529 MARCKSP29966 332 aaPredicted RBP20.07■□□□□ 0.8
SHMT2-206ENST00000553529 PTPAQ15257 358 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 SPATA31D4Q6ZUB0 917 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 KIFAP3Q92845 792 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 CLIC6Q96NY7 704 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 HERC2P3Q9BVR0 1158 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 CDT1Q9H211 546 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 SMOC2Q9H3U7 446 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 BLOC1S4Q9NUP1 217 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
SHMT2-206ENST00000553529 LOC730098B7Z3J9 87 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 ABLIM1O14639 778 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 SOD2P04179 222 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 PLCG1P19174 1290 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 GRIK3Q13003 919 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 MCM6Q14566 821 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 CBX2Q14781 532 aaPredicted RBP20.06■□□□□ 0.8
SHMT2-206ENST00000553529 PPP2R5AQ15172 486 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms