RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 LRRC15Q8TF66 581 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 ADPGKQ9BRR6 497 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 TIPINQ9BVW5 301 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 CHMP5Q9NZZ3 219 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 GIT1Q9Y2X7 761 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 SRPRBQ9Y5M8 271 aaKnown RBP25.98■■□□□ 1.75
TDP1-205ENST00000553527 SLC26A4O43511 780 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 DNM1Q05193 864 aaKnown RBP25.97■■□□□ 1.75
TDP1-205ENST00000553527 DLX2Q07687 328 aaPredicted RBP25.97■■□□□ 1.75
TDP1-205ENST00000553527 ARSHQ5FYA8 562 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 ATF7IP2Q5U623 682 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 EEF1DP3Q658K8 133 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 GPBP1Q86WP2 473 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.97■■□□□ 1.75
TDP1-205ENST00000553527 UHRF1Q96T88 793 aaPredicted RBP25.97■■□□□ 1.75
TDP1-205ENST00000553527 SNTG2Q9NY99 539 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 FAN1Q9Y2M0 1017 aa25.97■■□□□ 1.75
TDP1-205ENST00000553527 TRIP11Q15643 1979 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 LTBRP36941 435 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 OR1G1P47890 313 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 NASPP49321 788 aaPredicted RBP25.96■■□□□ 1.75
TDP1-205ENST00000553527 ADAM15Q13444 863 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 STK38Q15208 465 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 LEXMQ3ZCV2 418 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 PDE12Q6L8Q7 609 aaKnown RBP25.96■■□□□ 1.75
TDP1-205ENST00000553527 VPS52Q8N1B4 723 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 IGSF21Q96ID5 467 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 CCSER1Q9C0I3 900 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 BLOC1S4Q9NUP1 217 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 CFAP45Q9UL16 551 aa25.96■■□□□ 1.75
TDP1-205ENST00000553527 HIDE1A8MVS5 230 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 FSCN2O14926 492 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 KRT18P05783 430 aaKnown RBP25.95■■□□□ 1.74
TDP1-205ENST00000553527 PLS3P13797 630 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 NDUFV1P49821 464 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 SLC39A14Q15043 492 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 CTC1Q2NKJ3 1217 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 PTCRAQ6ISU1 281 aaPredicted RBP25.95■■□□□ 1.74
TDP1-205ENST00000553527 BCL7CQ8WUZ0 217 aaPredicted RBP25.95■■□□□ 1.74
TDP1-205ENST00000553527 RAD54LQ92698 747 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 PANK2Q9BZ23 570 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 ZHX3Q9H4I2 956 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 C17orf75Q9HAS0 396 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 KCND2Q9NZV8 630 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 CCDC39Q9UFE4 941 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 GDAQ9Y2T3 454 aa25.95■■□□□ 1.74
TDP1-205ENST00000553527 PRG3Q9Y2Y8 225 aaPredicted RBP25.95■■□□□ 1.74
TDP1-205ENST00000553527 NRP1O14786 923 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 YEATS4O95619 227 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 CXCL14O95715 111 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 SMTNP53814 917 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 KRT85P78386 507 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 RPS6KC1Q96S38 1066 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 TMEM134Q9H6X4 195 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 NGRNQ9NPE2 291 aaKnown RBP25.94■■□□□ 1.74
TDP1-205ENST00000553527 ARHGAP28Q9P2N2 729 aa25.94■■□□□ 1.74
TDP1-205ENST00000553527 PHLPP2Q6ZVD8 1323 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 TXLNAP40222 546 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 RBM10P98175 930 aaKnown RBP25.93■■□□□ 1.74
TDP1-205ENST00000553527 SMC1AQ14683 1233 aaKnown RBP25.93■■□□□ 1.74
TDP1-205ENST00000553527 COL19A1Q14993 1142 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 TAS1R3Q7RTX0 852 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 ZBTB33Q86T24 672 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 COLGALT2Q8IYK4 626 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 EFHBQ8N7U6 833 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 KRI1Q8N9T8 703 aaKnown RBP25.93■■□□□ 1.74
TDP1-205ENST00000553527 LINC00301Q8NCQ3 95 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 AUTS2Q8WXX7 1259 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 REEP2Q9BRK0 252 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 TMEM175Q9BSA9 504 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 TCHPQ9BT92 498 aa25.93■■□□□ 1.74
TDP1-205ENST00000553527 TARS2Q9BW92 718 aaKnown RBP25.93■■□□□ 1.74
TDP1-205ENST00000553527 MRPL4Q9BYD3 311 aaKnown RBP25.93■■□□□ 1.74
TDP1-205ENST00000553527 TBX10O75333 385 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 IL9P15248 144 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 STRN3Q13033 797 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 BMS1Q14692 1282 aaKnown RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 DUSP6Q16828 381 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 RRAGBQ5VZM2 374 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 LLGL2Q6P1M3 1020 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 DDX53Q86TM3 631 aaKnown RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 MYCT1Q8N699 235 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 TMEM87AQ8NBN3 555 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 GSTCDQ8NEC7 633 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 LARP4BQ92615 738 aaKnown RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 RABGGTAQ92696 567 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 ACO2Q99798 780 aaKnown RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 NTPCRQ9BSD7 190 aaKnown RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 LARSQ9P2J5 1176 aaKnown RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 KCNG1Q9UIX4 513 aa25.92■■□□□ 1.74
TDP1-205ENST00000553527 MORC2Q9Y6X9 1032 aaPredicted RBP25.92■■□□□ 1.74
TDP1-205ENST00000553527 CARNS1A5YM72 827 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 SPTLC2O15270 562 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 RECQL4O94761 1208 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 FAM13AO94988 1023 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 OSTNP61366 133 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 DCAF4L1Q3SXM0 396 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 MRPL43Q8N983 215 aaKnown RBP25.91■■□□□ 1.74
TDP1-205ENST00000553527 SPIRE2Q8WWL2 714 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 CHAMP1Q96JM3 812 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms