RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PHF20Q9BVI0 1012 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 CHST12Q9NRB3 414 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 CUEDC1Q9NWM3 386 aaPredicted RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 CACNA2D2Q9NY47 1150 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 KANSL3Q9P2N6 904 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 IGF2RP11717 2491 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 MYH8P13535 1937 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 MYH7BA7E2Y1 1941 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 FAM221BA6H8Z2 402 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 ZBTB5O15062 677 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 HBP1O60381 514 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 PAPLNO95428 1278 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 SSBP05455 408 aaKnown RBP eCLIP5.88□□□□□ -1.47
CKAP4-203ENST00000553039 URODP06132 367 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 MRPS9P82933 396 aaKnown RBP5.88□□□□□ -1.47
CKAP4-203ENST00000553039 CDC42EP1Q00587 391 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 PLCB4Q15147 1175 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 COL28A1Q2UY09 1125 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF484Q5JVG2 852 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 C1orf228Q6PIY5 440 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 GLB1LQ6UWU2 654 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 MFSD6Q6ZSS7 791 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 NOP9Q86U38 636 aaKnown RBP5.88□□□□□ -1.47
CKAP4-203ENST00000553039 FAM3CQ92520 227 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 FGF14Q92915 247 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 CUL5Q93034 780 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 GPATCH3Q96I76 525 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 RPS6KC1Q96S38 1066 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 LRRCC1Q9C099 1032 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 KAT14Q9H8E8 782 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 JMJD4Q9H9V9 463 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 SCUBE2Q9NQ36 999 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 ECHDC1Q9NTX5 307 aa5.88□□□□□ -1.47
CKAP4-203ENST00000553039 NDRG2Q9UN36 371 aaKnown RBP5.88□□□□□ -1.47
CKAP4-203ENST00000553039 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 M0R2C6 588 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 GIPC1O14908 333 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 TEX28O15482 410 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 NDUFB5O43674 189 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 XYLBO75191 536 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 PRPF40AO75400 957 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 ECI2O75521 394 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 RFPL2O75678 378 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 RHOBTB1O94844 696 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 EPN2O95208 641 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 PAPSS2O95340 614 aaPredicted RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 HNRNPA1P09651 372 aaKnown RBP eCLIP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 EIF4BP23588 611 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 TMOD1P28289 359 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 RAP1GAPP47736 663 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 MLLT6P55198 1093 aaPredicted RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 LRRC32Q14392 662 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 ALX1Q15699 326 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 KIZQ2M2Z5 673 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 CLLU1OSQ5K130 101 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 PLA2G2CQ5R387 149 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 PCNX4Q63HM2 1172 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 HEATR6Q6AI08 1181 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 DPH6Q7L8W6 267 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 WDR5BQ86VZ2 330 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 IQCA1Q86XH1 822 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 ITPRIPQ8IWB1 547 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 GPR65Q8IYL9 337 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 TSEN2Q8NCE0 465 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 LSM14AQ8ND56 463 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 IL31RAQ8NI17 732 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 HNRNPLLQ8WVV9 542 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 ESR2Q92731 530 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 DNASE1L2Q92874 299 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 FGF13Q92913 245 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 IRF7Q92985 503 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF707Q96C28 371 aaPredicted RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 PGBD4Q96DM1 585 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 LRIG1Q96JA1 1093 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 UBL7Q96S82 380 aaPredicted RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 TGIF2Q9GZN2 237 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 CPVLQ9H3G5 476 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 RNF41Q9H4P4 317 aaPredicted RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 NRDE2Q9H7Z3 1164 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 RXFP1Q9HBX9 757 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 HEBP1Q9NRV9 189 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 RNF19AQ9NV58 838 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 PCDHB3Q9Y5E6 796 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 BAZ2AQ9UIF9 1905 aaKnown RBP5.87□□□□□ -1.47
CKAP4-203ENST00000553039 FRYLO94915 3013 aa5.87□□□□□ -1.47
CKAP4-203ENST00000553039 MYO18BQ8IUG5 2567 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SDK1Q7Z5N4 2213 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 GREB1LQ9C091 1923 aaPredicted RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 J3QKU1 62 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 C2CD2LO14523 706 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 CAPN9O14815 690 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 KHNYNO15037 678 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 MAGEB2O15479 319 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 ARHGAP6O43182 974 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms