RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 RBAK-RBAKDNI3L0D1 243 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 AKR1B10O60218 316 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 ZNF862O60290 1169 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 OPA1O60313 960 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 BBOX1O75936 387 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 PRPF6O94906 941 aaKnown RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 HTR3BO95264 441 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 GOLGA8HP0CJ92 632 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 SNHG28P0DPA3 235 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 FCER1AP12319 257 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 TNFRSF8P28908 595 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 TXKP42681 527 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 KIF11P52732 1056 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 RAC1P63000 192 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 FKBP3Q00688 224 aaKnown RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 INPP5AQ14642 412 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 CCDC96Q2M329 555 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 ZNF385CQ66K41 422 aaPredicted RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 ZNF746Q6NUN9 644 aaPredicted RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 PDXDC1Q6P996 788 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 CREG2Q8IUH2 290 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 MAPKAPK5Q8IW41 473 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 MYOCDQ8IZQ8 938 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 GALNT11Q8NCW6 608 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 AFAP1L1Q8TED9 768 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 LRRC15Q8TF66 581 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 PIGSQ96S52 555 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 TM9SF2Q99805 663 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 IFIH1Q9BYX4 1025 aaKnown RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 FAM107BQ9H098 131 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 NT5C3AQ9H0P0 336 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 MMRN2Q9H8L6 949 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 RRAGCQ9HB90 399 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 SLC39A2Q9NP94 309 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 JADE2Q9NQC1 790 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 PICK1Q9NRD5 415 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 SWAP70Q9UH65 585 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 SRP68Q9UHB9 627 aaKnown RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 HYOU1Q9Y4L1 999 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 CASZ1Q86V15 1759 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 PLIN4Q96Q06 1357 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 COL24A1Q17RW2 1714 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 GAKO14976 1311 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SYNGAP1Q96PV0 1343 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 KDM3AQ9Y4C1 1321 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 TAF1P21675 1872 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 IGKV6D-41A0A0C4DH26 115 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SRGAP2O75044 1071 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 N4BP1O75113 896 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SYF2O95926 243 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SERPING1P05155 500 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CTSBP07858 339 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 PDHBP11177 359 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 ANXA13P27216 316 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 RFC4P35249 363 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 TNNT3P45378 269 aaPredicted RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 DGKGP49619 791 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 KLK7P49862 253 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 RHBDL3P58872 404 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 APBA1Q02410 837 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 VPS72Q15906 364 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 PPP2R5EQ16537 467 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 FXNQ16595 210 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 ASTE1Q2TB18 679 aaPredicted RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SLC9C1Q4G0N8 1177 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 EXOSC6Q5RKV6 272 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 HYIQ5T013 277 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 C10orf76Q5T2E6 689 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 EMBQ6PCB8 327 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 LYPD4Q6UWN0 246 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 GBP6Q6ZN66 633 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 LRRC55Q6ZSA7 311 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 RRAGAQ7L523 313 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CACNA2D4Q7Z3S7 1137 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 C2CD5Q86YS7 1000 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CCDC65Q8IXS2 484 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 FAM169BQ8N8A8 192 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 C19orf47Q8N9M1 422 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SLC44A5Q8NCS7 719 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SPATA4Q8NEY3 305 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 AENQ8WTP8 325 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 TMEM40Q8WWA1 233 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.56□□□□□ -1.362e-6■■■■■ 29
CHMP4A-210ENST00000552620 RPGRQ92834 1020 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CAVIN3Q969G5 261 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CEP95Q96GE4 821 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 RBM17Q96I25 401 aaKnown RBP6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CAPZA3Q96KX2 299 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 NOX5Q96PH1 765 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 DEPDC7Q96QD5 511 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 OSBPL9Q96SU4 736 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SUGCTQ9HAC7 445 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 MTMR4Q9NYA4 1195 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 CEP72Q9P209 647 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 ARHGAP20Q9P2F6 1191 aa6.56□□□□□ -1.36
CHMP4A-210ENST00000552620 SAP30BPQ9UHR5 308 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms