RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 NOL9Q5SY16 702 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 HGSNATQ68CP4 663 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 B3GNT9Q6UX72 402 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 TAOK1Q7L7X3 1001 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 OR2W6PQ8NHA6 318 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 PIGOQ8TEQ8 1089 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 FBF1Q8TES7 1133 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 SH3TC2Q8TF17 1288 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ATXN2LQ8WWM7 1075 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ZBTB10Q96DT7 871 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 INTS9Q9NV88 658 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 USP15Q9Y4E8 981 aaPredicted RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 BZW2Q9Y6E2 419 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 PHIPQ8WWQ0 1821 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 IRF6O14896 467 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 CETN3O15182 167 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 GAS7O60861 476 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 NOL4O94818 638 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 CHN1P15882 459 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 MUTP22033 750 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 NCALDP61601 193 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 GHRHRQ02643 423 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 DHX9Q08211 1270 aaKnown RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 TAF11Q15544 211 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 C9orf131Q5VYM1 1079 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 MTHFD1LQ6UB35 978 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 TPH2Q8IWU9 490 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 SYCE1Q8N0S2 351 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 RASGEF1CQ8N431 466 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 CLEC4DQ8WXI8 215 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 DCPSQ96C86 337 aaKnown RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 KLHL29Q96CT2 875 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 BICD1Q96G01 975 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 ZNF577Q9BSK1 485 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 OSBPL1AQ9BXW6 950 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 TXLNGYQ9BZA5 131 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 BCAS3Q9H6U6 928 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 ECT2Q9H8V3 914 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 TTC7AQ9ULT0 858 aaPredicted RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 RPL26L1Q9UNX3 145 aaKnown RBP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 L3MBTL1Q9Y468 752 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 SCN4AP35499 1836 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 RPTORQ8N122 1335 aa11.85□□□□□ -0.51
TUBA1C-209ENST00000552448 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 PDLIM1O00151 329 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 PDXKO00764 312 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 KCNK3O14649 394 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 ZBTB39O15060 712 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 CHMP2AO43633 222 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 FTCDO95954 541 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 RARAP10276 462 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 GAP43P17677 238 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 NR2F2P24468 414 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 MSH2P43246 934 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 ALDH5A1P51649 535 aaPredicted RBP11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 CCDC15Q0P6D6 951 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 RPUSD2Q8IZ73 545 aaKnown RBP11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 SAMD3Q8N6K7 520 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 NEK9Q8TD19 979 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 NAP1L3Q99457 506 aaPredicted RBP11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 FMO2Q99518 471 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 MXRA8Q9BRK3 442 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 VCXQ9H320 206 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 UNC45AQ9H3U1 944 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 WRAP73Q9P2S5 460 aaPredicted RBP11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
TUBA1C-209ENST00000552448 FAM187AA6NFU0 413 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 NFIBO00712 420 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 SNX3O60493 162 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 SMIM24O75264 130 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 ITGB5P18084 799 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 PTPRAP18433 802 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 DGKZQ13574 1117 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 EPHA7Q15375 998 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 PARP6Q2NL67 630 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 FRMD5Q7Z6J6 570 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 SULF1Q8IWU6 871 aa11.83□□□□□ -0.51
TUBA1C-209ENST00000552448 ZNF280CQ8ND82 737 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms