RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ITGB1P05556 798 aa20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 GAP43P17677 238 aa20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 AKAP5P24588 427 aa20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 TAS1R3Q7RTX0 852 aa20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 ACO2Q99798 780 aaKnown RBP20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 SEL1LQ9UBV2 794 aa20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 ZMYM2Q9UBW7 1377 aa20.28■□□□□ 0.84
PRPF40B-216ENST00000552301 ARL5CA6NH57 179 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 FGF18O76093 207 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 POMCP01189 267 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 HARSP12081 509 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 MATR3P43243 847 aaKnown RBP eCLIP20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 UBE3AQ05086 875 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 E2F4Q16254 413 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 ADALQ6DHV7 355 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 SFR1Q86XK3 245 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 SPG21Q9NZD8 308 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 ANKFY1Q9P2R3 1169 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 PUF60Q9UHX1 559 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 KCNH3Q9ULD8 1083 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 TCHHQ07283 1943 aa20.27■□□□□ 0.84
PRPF40B-216ENST00000552301 CHD7Q9P2D1 2997 aa20.27■□□□□ 0.83
PRPF40B-216ENST00000552301 RECQL4O94761 1208 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 PBX3P40426 434 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 LIG4P49917 911 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 SCNN1GP51170 649 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 BCAR1P56945 870 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 KRT17Q04695 432 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 MPZL3Q6UWV2 235 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 ZPBP2Q6X784 338 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 ZBTB33Q86T24 672 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 CCDC65Q8IXS2 484 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 CEP57L1Q8IYX8 460 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 SPPL3Q8TCT6 385 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 POF1BQ8WVV4 589 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 STAMQ92783 540 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 PPP2R3CQ969Q6 453 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 TMEM169Q96HH4 297 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 ZFP42Q96MM3 310 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 CCDC94Q9BW85 323 aaPredicted RBP20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 CDT1Q9H211 546 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 NRDE2Q9H7Z3 1164 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 KLK14Q9P0G3 267 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 GDAQ9Y2T3 454 aa20.26■□□□□ 0.83
PRPF40B-216ENST00000552301 HNRNPDLO14979 420 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 INPPL1O15357 1258 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 TOM1L1O75674 476 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 MCF2P10911 925 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 CMA1P23946 247 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 YARSP54577 528 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 ASIC1P78348 528 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 NOLC1Q14978 699 aaKnown RBP eCLIP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 TPRNQ4KMQ1 711 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 HERC4Q5GLZ8 1057 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 DNAJC19Q96DA6 116 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 NSUN3Q9H649 340 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 MRPL44Q9H9J2 332 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 PANK4Q9NVE7 773 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 KBTBD4Q9NVX7 518 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 CIZ1Q9ULV3 898 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 TBX20Q9UMR3 447 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 CDH23Q9H251 3354 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 MYO7AQ13402 2215 aa20.25■□□□□ 0.83
PRPF40B-216ENST00000552301 NR1I2O75469 434 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 PFKFB1P16118 471 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 NMT1P30419 496 aaKnown RBP20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 AFF1P51825 1210 aaKnown RBP20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 PLCB3Q01970 1234 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 GRIK3Q13003 919 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 SLC39A11Q8N1S5 342 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 MICAL1Q8TDZ2 1067 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 MRPS27Q92552 414 aaKnown RBP20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 KCNN1Q92952 543 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 TMEM175Q9BSA9 504 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 TLR9Q9NR96 1032 aa20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 TOPORSQ9NS56 1045 aaPredicted RBP20.24■□□□□ 0.83
PRPF40B-216ENST00000552301 GOLGA6L4A6NEF3 574 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 NT5C1B-RDH14C9J2C7 533 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 CLDN3O15551 220 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 GRM5P41594 1212 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 BMS1Q14692 1282 aaKnown RBP20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 ZNF280BQ86YH2 543 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 HVCN1Q96D96 273 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 TRIM9Q9C026 710 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 ST6GALNAC4Q9H4F1 302 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 PTPRHQ9HD43 1115 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 ENTPD7Q9NQZ7 604 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 TBC1D7Q9P0N9 293 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 DNAJB4Q9UDY4 337 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 LZTS1Q9Y250 596 aa20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 TDRD15B5MCY1 1934 aaKnown RBP20.23■□□□□ 0.83
PRPF40B-216ENST00000552301 PLXNA4Q9HCM2 1894 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 A0A1B0GVL5 298 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 A0A1W2PQ27 194 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 A0A1W2PQ64 194 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 A0A1W2PQD8 194 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms