RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 SEMA4DQ92854 862 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 CABS1Q96KC9 395 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 NUP85Q9BW27 656 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 EPB41L4BQ9H329 900 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 TCEAL9Q9UHQ7 104 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 TRPC6Q9Y210 931 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 ZNF646O15015 1829 aaPredicted RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 PLSCR1O15162 318 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 MAPTP10636 758 aaKnown RBP14.02□□□□□ -0.17
CACNB3-219ENST00000551544 CHRNA3P32297 505 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 RPL21P46778 160 aaKnown RBP14.02□□□□□ -0.17
CACNB3-219ENST00000551544 GTF2BQ00403 316 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 DGKZQ13574 1117 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 HOOK3Q86VS8 718 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 C12orf56Q8IXR9 622 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 FAM71AQ8IYT1 594 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 CLEC4DQ8WXI8 215 aa14.02□□□□□ -0.17
CACNB3-219ENST00000551544 RNF25Q96BH1 459 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-219ENST00000551544 PABPC3Q9H361 631 aaKnown RBP14.02□□□□□ -0.17
CACNB3-219ENST00000551544 NOCTQ9UK39 431 aaKnown RBP14.02□□□□□ -0.17
CACNB3-219ENST00000551544 LOC102724159A0A0B4J2E5 919 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 ANKRD63C9JTQ0 380 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 PEX5P50542 639 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 SLC29A2Q14542 456 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 PWP2Q15269 919 aaKnown RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 SNRNP35Q16560 246 aaKnown RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 XKR9Q5GH70 373 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 UBAP2Q5T6F2 1119 aaKnown RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 CCDC105Q8IYK2 499 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 ZNF564Q8TBZ8 553 aaPredicted RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 VTI1AQ96AJ9 217 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 ZNF653Q96CK0 615 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 RPS6KC1Q96S38 1066 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 GRHL1Q9NZI5 618 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 RPTORQ8N122 1335 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 KCNJ1P48048 391 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 SELENOSQ9BQE4 189 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 SEMA4AQ9H3S1 761 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 TOPORSQ9NS56 1045 aaPredicted RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
CACNB3-219ENST00000551544 ASTN2O75129 1339 aaPredicted RBP14.01□□□□□ -0.17
CACNB3-219ENST00000551544 HSPA6P17066 643 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CTNNA2P26232 953 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 ADSSP30520 456 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 MFAP3P55082 362 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 FMO1Q01740 532 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 TLCD1Q96CP7 247 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14□□□□□ -0.17
CACNB3-219ENST00000551544 ATP9AO75110 1047 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CALCAP01258 141 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 GZMAP12544 262 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 FGFR4P22455 802 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 DRG2P55039 364 aaKnown RBP14□□□□□ -0.17
CACNB3-219ENST00000551544 PCNX4Q63HM2 1172 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CCDC121Q6ZUS5 278 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CPLX4Q7Z7G2 160 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 SYTL5Q8TDW5 730 aaPredicted RBP14□□□□□ -0.17
CACNB3-219ENST00000551544 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
CACNB3-219ENST00000551544 ZNF277Q9NRM2 450 aaPredicted RBP14□□□□□ -0.17
CACNB3-219ENST00000551544 PCYOX1Q9UHG3 505 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 PODXLO00592 558 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 ASNSP08243 561 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 NUDT17P0C025 328 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CYP11B1P15538 503 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 SLCO1A2P46721 670 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CDR1P51861 262 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 SOX10P56693 466 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 PLCB4Q15147 1175 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 SPDYCQ5MJ68 293 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 KRT39Q6A163 491 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 MCF2L2Q86YR7 1114 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 TACO1Q9BSH4 297 aaKnown RBP14□□□□□ -0.17
CACNB3-219ENST00000551544 AZI2Q9H6S1 392 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 MTRF1LQ9UGC7 380 aaKnown RBP14□□□□□ -0.17
CACNB3-219ENST00000551544 MTUS1Q9ULD2 1270 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 TBX20Q9UMR3 447 aa14□□□□□ -0.17
CACNB3-219ENST00000551544 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
CACNB3-219ENST00000551544 RARAP10276 462 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 CNGA1P29973 690 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 MAP2K2P36507 400 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 PDE6CP51160 858 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 SF3A3Q12874 501 aaKnown RBP eCLIP13.99□□□□□ -0.17
CACNB3-219ENST00000551544 C6orf89Q6UWU4 347 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 NIPA1Q7RTP0 329 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 CCDC25Q86WR0 208 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 SLC13A5Q86YT5 568 aaPredicted RBP13.99□□□□□ -0.17
CACNB3-219ENST00000551544 TAS1R2Q8TE23 839 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 SHC3Q92529 594 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 SEC16BQ96JE7 1060 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 FAM84AQ96KN4 292 aa13.99□□□□□ -0.17
CACNB3-219ENST00000551544 GMLQ99445 158 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms