RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 TRIM49CP0CI26 452 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 GLRA2P23416 452 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 TCF7P36402 384 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-213ENST00000550831 GPC3P51654 580 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 PPP3CAQ08209 521 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-213ENST00000550831 TCEAL1Q15170 157 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 ELF2Q15723 593 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 MTERF2Q49AM1 385 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 IER5Q5VY09 327 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 KRT39Q6A163 491 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 SLFN12LQ6IEE8 588 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 LRRN4CLQ8ND94 238 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 ATP8B4Q8TF62 1192 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 SCFD2Q8WU76 684 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 TCP11Q8WWU5 503 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 CALR3Q96L12 384 aaKnown RBP9.97□□□□□ -0.81
TMEM116-213ENST00000550831 NOX5Q96PH1 765 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 R3HDMLQ9H3Y0 253 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 PCIF1Q9H4Z3 704 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 TMEM8AQ9HCN3 771 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 NAGPAQ9UK23 515 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 DNAJC12Q9UKB3 198 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 AJAP1Q9UKB5 411 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-213ENST00000550831 DUSP10Q9Y6W6 482 aa9.97□□□□□ -0.81
TMEM116-213ENST00000550831 BTBD19C9JJ37 291 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 CES2O00748 559 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ADCY3O60266 1144 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 EVI5O60447 810 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ATP1A1P05023 1023 aaKnown RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 MXI1P50539 228 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 EFNA5P52803 228 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 CHMP4BP1P59074 171 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 DLG4P78352 724 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 POU5F1BQ06416 359 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 CKAP4Q07065 602 aaKnown RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 CYP24A1Q07973 514 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 TTLL4Q14679 1199 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 DRAP1Q14919 205 aaPredicted RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 LY6KQ17RY6 165 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 CDCA2Q69YH5 1023 aaPredicted RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 PHLDB3Q6NSJ2 640 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 RGMBQ6NW40 437 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ZPBP2Q6X784 338 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 C15orf39Q6ZRI6 1047 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 MSANTD4Q8NCY6 345 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ASAP3Q8TDY4 903 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ZIC5Q96T25 663 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 TMEM117Q9H0C3 514 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 AZI2Q9H6S1 392 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 MLXIPQ9HAP2 919 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 GBA2Q9HCG7 927 aaPredicted RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ZCCHC17Q9NP64 241 aaKnown RBP9.96□□□□□ -0.82
TMEM116-213ENST00000550831 RNF14Q9UBS8 474 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ADAMTS1Q9UHI8 967 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 SNX12Q9UMY4 172 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ZSWIM8A7E2V4 1837 aa9.96□□□□□ -0.82
TMEM116-213ENST00000550831 ADGRA2Q96PE1 1338 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 LRRIQ3A6PVS8 624 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 FAM155AB1AL88 458 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 ZBTB42B2RXF5 422 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 PDHXO00330 501 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 HNRNPDLO14979 420 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 ATP8B1O43520 1251 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 PGK2P07205 417 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CTAGE8P0CG41 777 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 HOXD8P13378 290 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 TCP1P17987 556 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 SP4Q02446 784 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 STRN3Q13033 797 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 MXD4Q14582 209 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 PSMD6Q15008 389 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 IFI16Q16666 785 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 FAM110CQ1W6H9 321 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 SPRYD7Q5W111 196 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 ALKBH5Q6P6C2 394 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 ENOSF1Q7L5Y1 443 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CBWD2Q8IUF1 395 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 PSPC1Q8WXF1 523 aaKnown RBP9.95□□□□□ -0.82
TMEM116-213ENST00000550831 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 NFKBIZQ9BYH8 718 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 KATNBL1Q9H079 304 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CCDC113Q9H0I3 377 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 SMARCAD1Q9H4L7 1026 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 SALL4Q9UJQ4 1053 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 RAB21Q9UL25 225 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 TFR2Q9UP52 801 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 CAPN6Q9Y6Q1 641 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 MCM3APO60318 1980 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 MYH10P35580 1976 aa9.95□□□□□ -0.82
TMEM116-213ENST00000550831 A0A0B4J269 797 aa9.94□□□□□ -0.82
TMEM116-213ENST00000550831 CCL15-CCL14A0A0B4J2E2 113 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms