RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	MAPK8IP1	Q9UQF2	711 aa		10.44	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CNTNAP2	Q9UHC6	1331 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811		K7ERI5	159 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	HNRNPDL	O14979	420 aa	Known RBP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	EIF4B	P23588	611 aa	Known RBP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ZNF445	P59923	1031 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PAK1	Q13153	545 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FAM187B	Q17R55	369 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FBXO47	Q5MNV8	452 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	KLHL10	Q6JEL2	608 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TRAF7	Q6Q0C0	670 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	LRSAM1	Q6UWE0	723 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	SYCP3	Q8IZU3	236 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ADSSL1	Q8N142	457 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ZNF507	Q8TCN5	953 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TMEM40	Q8WWA1	233 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	BICD1	Q96G01	975 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	HTATIP2	Q9BUP3	242 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	MRPL4	Q9BYD3	311 aa	Known RBP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	NAT10	Q9H0A0	1025 aa	Known RBP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TMEM206	Q9H813	350 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	MINDY3	Q9H8M7	445 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TMEM39A	Q9NV64	488 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FKBPL	Q9UIM3	349 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	SCN5A	Q14524	2016 aa		10.43	□□□□□ -0.74
TUBA1A-208	ENST00000550811	LTBP2	Q14767	1821 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	BICDL2	A1A5D9	508 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ACKR2	O00590	384 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TSPAN1	O60635	241 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CSDE1	O75534	798 aa	Known RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	RPS6KA5	O75582	802 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PARN	O95453	639 aa	Known RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PIGR	P01833	764 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	GHR	P10912	638 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	SKI	P12755	728 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	LIG4	P49917	911 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PAK2	Q13177	524 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PRPF4B	Q13523	1007 aa	Known RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	KNOP1	Q1ED39	458 aa	Known RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ANO6	Q4KMQ2	910 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TSHZ1	Q6ZSZ6	1077 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	HS2ST1	Q7LGA3	356 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CATSPER4	Q7RTX7	472 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FAM228A	Q86W67	206 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	USP38	Q8NB14	1042 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	NELFB	Q8WX92	580 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TSG101	Q99816	390 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	GBP3	Q9H0R5	595 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	DNAJC25	Q9H1X3	360 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FZD8	Q9H461	694 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TSPY26P	Q9H489	355 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TYW1	Q9NV66	732 aa	Known RBP	10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	GPSM3	Q9Y4H4	160 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	SQOR	Q9Y6N5	450 aa		10.42	□□□□□ -0.74
TUBA1A-208	ENST00000550811	UMODL1	Q5DID0	1318 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	KIAA0355	O15063	1070 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	B4GALT5	O43286	388 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CALU	O43852	315 aa	Predicted RBP	10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	EDN1	P05305	212 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	IQCF3	P0C7M6	154 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FGFR4	P22455	802 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CCNE1	P24864	410 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	AXL	P30530	894 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	HOXD13	P35453	343 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	LRRC63	Q05C16	580 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	NCBP1	Q09161	790 aa	Known RBP	10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	LPIN1	Q14693	890 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	MBTPS1	Q14703	1052 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TMEM164	Q5U3C3	297 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ATF7IP2	Q5U623	682 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ZPBP2	Q6X784	338 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	C7orf61	Q8IZ16	206 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	GOLGA5	Q8TBA6	731 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	P2RX5	Q93086	422 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	WNT8A	Q9H1J5	351 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	KCTD10	Q9H3F6	313 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	AGPAT5	Q9NUQ2	364 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CGN	Q9P2M7	1197 aa	Known RBP	10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ANKFY1	Q9P2R3	1169 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PRKAG2	Q9UGJ0	569 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	RWDD2A	Q9UIY3	292 aa		10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PIN4	Q9Y237	131 aa	Known RBP	10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	NOC2L	Q9Y3T9	749 aa	Known RBP	10.41	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TRIM43B	A6NCK2	446 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TRIM49B	A6NDI0	452 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	PDXK	O00764	312 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	N4BP3	O15049	544 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	GPR182	O15218	404 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	TOM1L1	O75674	476 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CAVIN2	O95810	425 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	FBXO45	P0C2W1	286 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	RAG1	P15918	1043 aa		10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ARF4	P18085	180 aa	Predicted RBP	10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	ERCC5	P28715	1186 aa	Predicted RBP	10.4	□□□□□ -0.74
TUBA1A-208	ENST00000550811	CD52	P31358	61 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms