RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PAAF1Q9BRP4 392 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 C2orf40Q9H1Z8 148 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 MBTPS2O43462 519 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 NCK2O43639 380 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 LILRB3O75022 631 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 CLASP2O75122 1294 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 PPM1AP35813 382 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 NCBP1Q09161 790 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 DHX8Q14562 1220 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 NAB2Q15742 525 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 KANK3Q6NY19 840 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 LLGL2Q6P1M3 1020 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 TMEM130Q8N3G9 435 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 CEP120Q8N960 986 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 AK8Q96MA6 479 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 FAN1Q9Y2M0 1017 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 GIT1Q9Y2X7 761 aa13.01□□□□□ -0.33
LETMD1-221ENST00000550100 PRG3Q9Y2Y8 225 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 TDRD15B5MCY1 1934 aaKnown RBP13.01□□□□□ -0.33
LETMD1-221ENST00000550100 MYH11P35749 1972 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 A0A087X0B3 334 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 K7ERI5 159 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 N4BP3O15049 544 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 RECQL4O94761 1208 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 ALDH2P05091 517 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 LONP1P36776 959 aaKnown RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 UBA7P41226 1012 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 NDUFV1P49821 464 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 PPP2R5AQ15172 486 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 PDE12Q6L8Q7 609 aaKnown RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 SYCE2Q6PIF2 218 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 RAD54LQ92698 747 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 TMEM169Q96HH4 297 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 B3GALT6Q96L58 329 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 APOL5Q9BWW9 433 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 HAPLN2Q9GZV7 340 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 S1PR5Q9H228 398 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 NGRNQ9NPE2 291 aaKnown RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 KANSL3Q9P2N6 904 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 CD207Q9UJ71 328 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 GDAQ9Y2T3 454 aa13□□□□□ -0.33
LETMD1-221ENST00000550100 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
LETMD1-221ENST00000550100 CTSAP10619 480 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 PLS3P13797 630 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 OR1G1P47890 313 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 EFNA5P52803 228 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 COASYQ13057 564 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 GIT2Q14161 759 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 ATF7IP2Q5U623 682 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 TMEM184AQ6ZMB5 413 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 GPBP1Q86WP2 473 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
LETMD1-221ENST00000550100 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 FIZ1Q96SL8 496 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 REEP2Q9BRK0 252 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 TMEM175Q9BSA9 504 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 GPR62Q9BZJ7 368 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 CDT1Q9H211 546 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 EPHX3Q9H6B9 360 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
LETMD1-221ENST00000550100 BMP15O95972 392 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 MAPTP10636 758 aaKnown RBP12.98□□□□□ -0.33
LETMD1-221ENST00000550100 PROZP22891 400 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 ZP2Q05996 745 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
LETMD1-221ENST00000550100 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 SMAD2Q15796 467 aaKnown RBP12.98□□□□□ -0.33
LETMD1-221ENST00000550100 SEZ6Q53EL9 994 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 ZBTB33Q86T24 672 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 SLC22A17Q8WUG5 538 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 RSPH1Q8WYR4 309 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 CHAMP1Q96JM3 812 aa12.98□□□□□ -0.33
LETMD1-221ENST00000550100 DRC1Q96MC2 740 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms