RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 NDUFA10O95299 355 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 ADCYAP1R1P41586 468 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 AVPR1BP47901 424 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 SCNN1BP51168 640 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 SEC24CP53992 1094 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 PHC1P78364 1004 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 DUSP2Q05923 314 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 PRR16Q569H4 304 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 DRICH1Q6PGQ1 229 aaPredicted RBP6.05□□□□□ -1.44
CCDC38-208ENST00000549876 ESPNLQ6ZVH7 1005 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 NPM2Q86SE8 214 aaKnown RBP6.05□□□□□ -1.44
CCDC38-208ENST00000549876 AHI1Q8N157 1196 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 ZNF610Q8N9Z0 462 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 MFSD3Q96ES6 412 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 TEX101Q9BY14 249 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 INO80BQ9C086 356 aaPredicted RBP6.05□□□□□ -1.44
CCDC38-208ENST00000549876 CLCA2Q9UQC9 943 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 PLAAQ9Y263 795 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 PIPSLA2A3N6 862 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 GSG1L2A8MUP6 293 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 PRR5-ARHGAP8B1AHC4 643 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 RNASE9P60153 205 aaKnown RBP6.04□□□□□ -1.44
CCDC38-208ENST00000549876 NHLH2Q02577 135 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 FOXI1Q12951 378 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 TERF2Q15554 542 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 PLXDC1Q8IUK5 500 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.04□□□□□ -1.44
CCDC38-208ENST00000549876 ALG13Q9NP73 1137 aaKnown RBP6.04□□□□□ -1.44
CCDC38-208ENST00000549876 TMPRSS11EQ9UL52 423 aa6.04□□□□□ -1.44
CCDC38-208ENST00000549876 COL11A2P13942 1736 aaPredicted RBP6.03□□□□□ -1.44
CCDC38-208ENST00000549876 PRSS38A1L453 326 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 FKBP9O95302 570 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 HSP90B1P14625 803 aaKnown RBP6.03□□□□□ -1.44
CCDC38-208ENST00000549876 LSSP48449 732 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 GPR15P49685 360 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 CCDC178Q5BJE1 867 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 FBXO42Q6P3S6 717 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 FKBP9P1Q75LS8 142 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 GLCCI1Q86VQ1 547 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 CMTR2Q8IYT2 770 aaKnown RBP6.03□□□□□ -1.44
CCDC38-208ENST00000549876 FAM98AQ8NCA5 519 aaKnown RBP6.03□□□□□ -1.44
CCDC38-208ENST00000549876 CPEB3Q8NE35 698 aaKnown RBP6.03□□□□□ -1.44
CCDC38-208ENST00000549876 ADAM2Q99965 735 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 USP18Q9UMW8 372 aa6.03□□□□□ -1.44
CCDC38-208ENST00000549876 ENPP3O14638 875 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 HKR1P10072 659 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 LSP1P33241 339 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 OCRLQ01968 901 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 SART3Q15020 963 aaKnown RBP6.02□□□□□ -1.45
CCDC38-208ENST00000549876 LYSMD2Q8IV50 215 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 OR2W6PQ8NHA6 318 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 GAB3Q8WWW8 586 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 INSL6Q9Y581 213 aa6.02□□□□□ -1.45
CCDC38-208ENST00000549876 ST20-MTHFSA0A0A6YYL1 179 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 MARCH11A6NNE9 402 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 IL2P60568 153 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 GUCY1B3Q02153 619 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 UBE3CQ15386 1083 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 PDCD4Q53EL6 469 aaKnown RBP6.01□□□□□ -1.45
CCDC38-208ENST00000549876 ABHD17BQ5VST6 288 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 METRNLQ641Q3 311 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 ANKS6Q68DC2 871 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 SLC41A1Q8IVJ1 513 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 SIMC1Q8NDZ2 872 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 OR10H5Q8NGA6 315 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 CAVIN3Q969G5 261 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 FERMT2Q96AC1 680 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 SPON1Q9HCB6 807 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 EMC7Q9NPA0 242 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 PPP2R3BQ9Y5P8 575 aa6.01□□□□□ -1.45
CCDC38-208ENST00000549876 SPATA31A6Q5VVP1 1343 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 UNC119BA6NIH7 251 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 NRP2O60462 931 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 PDE8AO60658 829 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 EGR2P11161 476 aaPredicted RBP6□□□□□ -1.45
CCDC38-208ENST00000549876 MANFP55145 182 aaKnown RBP6□□□□□ -1.45
CCDC38-208ENST00000549876 BLOC1S1P78537 153 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 APBA1Q02410 837 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 MGAT5Q09328 741 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 TP53BP2Q13625 1128 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 BROXQ5VW32 411 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 LEO1Q8WVC0 666 aaPredicted RBP6□□□□□ -1.45
CCDC38-208ENST00000549876 ANO3Q9BYT9 981 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 PRDM12Q9H4Q4 367 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 TBX22Q9Y458 520 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 NUMBLQ9Y6R0 609 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 ZMYM3Q14202 1370 aa6□□□□□ -1.45
CCDC38-208ENST00000549876 POLR2AP24928 1970 aaKnown RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 LTA4HP09960 611 aaKnown RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 RBP3P10745 1247 aa5.99□□□□□ -1.45
CCDC38-208ENST00000549876 MYCLP1P12525 358 aaPredicted RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 XPAP23025 273 aaPredicted RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 DDX6P26196 483 aaKnown RBP eCLIP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 PTH2RP49190 550 aa5.99□□□□□ -1.45
CCDC38-208ENST00000549876 NRG3P56975 720 aa5.99□□□□□ -1.45
CCDC38-208ENST00000549876 TRIM25Q14258 630 aaKnown RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 FAM102AQ5T9C2 384 aaPredicted RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 FRMD7Q6ZUT3 714 aa5.99□□□□□ -1.45
CCDC38-208ENST00000549876 ASB10Q8WXI3 467 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms