RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MYCBPQ99417 103 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 GPRC5CQ9NQ84 441 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 KLC4Q9NSK0 619 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 ODF2LQ9ULJ1 636 aa11.95□□□□□ -0.5
LINC00661-204ENST00000549354 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
LINC00661-204ENST00000549354 GMNCA6NCL1 334 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 EIF3DO15371 548 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 FAM107AO95990 144 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 SHBGP04278 402 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 FNTAP49354 379 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 LBX2Q6XYB7 198 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 CCDC91Q7Z6B0 441 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PPM1KQ8N3J5 372 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 RDM1Q8NG50 284 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 TMBIM4Q9HC24 238 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PDXKO00764 312 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 STAM2O75886 525 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 H2AFZP0C0S5 128 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PON1P27169 355 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 ECHS1P30084 290 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PRKG1Q13976 671 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 DRAP1Q14919 205 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 H2AFVQ71UI9 128 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 IRF2BP2Q7Z5L9 587 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 RAPGEF5Q92565 580 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 FIZ1Q96SL8 496 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 OSBPL7Q9BZF2 842 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 SLC40A1Q9NP59 571 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 CYP39A1Q9NYL5 469 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 LCTP09848 1927 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 HMGB1P1B2RPK0 211 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 ADM5C9JUS6 153 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PPP1R12BO60237 982 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 AFPP02771 609 aaKnown RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 DLATP10515 647 aaKnown RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 CDC25CP30307 473 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 DLG4P78352 724 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 PPATQ06203 517 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 KNOP1Q1ED39 458 aaKnown RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 SYCP2LQ5T4T6 812 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 ZNF572Q7Z3I7 529 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 ARHGEF26Q96DR7 871 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 SAAL1Q96ER3 474 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 LXNQ9BS40 222 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 STRA6Q9BX79 667 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 HEMGNQ9BXL5 484 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 ISCUQ9H1K1 167 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 UBE2TQ9NPD8 197 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-204ENST00000549354 DNAJC12Q9UKB3 198 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 UBE4BO95155 1302 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 IGSF9BQ9UPX0 1349 aa11.94□□□□□ -0.5
LINC00661-204ENST00000549354 IRF6O14896 467 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CAND2O75155 1236 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 ACSL3O95573 720 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 VIMP08670 466 aaKnown RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 EIF2AK2P19525 551 aaKnown RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 TNFAIP3P21580 790 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CCND2P30279 289 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CBWD6Q4V339 395 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 FAM133BQ5BKY9 247 aaKnown RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CBWD3Q5JTY5 395 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CBWD5Q5RIA9 395 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 MIER3Q7Z3K6 550 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CCDC50Q8IVM0 306 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 FAM186BQ8IYM0 893 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CHST13Q8NET6 341 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 TPCN2Q8NHX9 752 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 THAP2Q9H0W7 228 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 GANQ9H2C0 597 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 ACAD9Q9H845 621 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 A0A0G2JLL6 359 aaPredicted RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CCDC169A6NNP5 214 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CXCL11O14625 94 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 IREB2P48200 963 aaKnown RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 PRRT2Q7Z6L0 340 aaPredicted RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 SUGP1Q8IWZ8 645 aaKnown RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 FAM178BQ8IXR5 827 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 CNPY4Q8N129 248 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 NSUN6Q8TEA1 469 aaKnown RBP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 TMEM174Q8WUU8 243 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 SEC16BQ96JE7 1060 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 KLHL11Q9NVR0 708 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 BAIAP2L1Q9UHR4 511 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 USTQ9Y2C2 406 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 NR3C2P08235 984 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 SFNP31947 248 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 STAT1P42224 750 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 JAK3P52333 1124 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 C4orf19Q8IY42 314 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 SLC35G2Q8TBE7 412 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms