RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 RNF135Q8IUD6 432 aa20.58■□□□□ 0.89
CHMP1A-207ENST00000549328 AUTS2Q8WXX7 1259 aa20.58■□□□□ 0.89
CHMP1A-207ENST00000549328 ADPGKQ9BRR6 497 aa20.58■□□□□ 0.89
CHMP1A-207ENST00000549328 PDZD7Q9H5P4 517 aa20.58■□□□□ 0.89
CHMP1A-207ENST00000549328 TTLL13PA6NNM8 815 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 E9PMD0 336 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 LILRB3O75022 631 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 EFEMP2O95967 443 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 SOD2P04179 222 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 GRIK3Q13003 919 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 CUL4AQ13619 759 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 HERC4Q5GLZ8 1057 aaPredicted RBP20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 SLC22A17Q8WUG5 538 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 COLEC11Q9BWP8 271 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 EMILIN2Q9BXX0 1053 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 ADAM7Q9H2U9 754 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 MRPL17Q9NRX2 175 aaKnown RBP20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 DZANK1Q9NVP4 752 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 MARCH5Q9NX47 278 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 PARP2Q9UGN5 583 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 SSX2IPQ9Y2D8 614 aa20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 PRG3Q9Y2Y8 225 aaPredicted RBP20.57■□□□□ 0.88
CHMP1A-207ENST00000549328 K7ERI5 159 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 TMEM132AQ24JP5 1023 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 CES5AQ6NT32 575 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 C1orf186Q6ZWK4 172 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 RNF168Q8IYW5 571 aaPredicted RBP20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 TIPINQ9BVW5 301 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 NT5C3AQ9H0P0 336 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 C17orf75Q9HAS0 396 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 POLD4Q9HCU8 107 aa20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 TDRD15B5MCY1 1934 aaKnown RBP20.56■□□□□ 0.88
CHMP1A-207ENST00000549328 PRR33A8MZF0 331 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 RINT1Q6NUQ1 792 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 KCNK18Q7Z418 384 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 BRAPQ7Z569 592 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 DAW1Q8N136 415 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 AK8Q96MA6 479 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 DRC1Q96MC2 740 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 NECTIN4Q96NY8 510 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 KLHL5Q96PQ7 755 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 RPS6KC1Q96S38 1066 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 HERC2P3Q9BVR0 1158 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 KLK14Q9P0G3 267 aa20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
CHMP1A-207ENST00000549328 PHLPP2Q6ZVD8 1323 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 VWA3AA6NCI4 1184 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 SLC26A4O43511 780 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 HIP1RO75146 1068 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 BMP15O95972 392 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 URODP06132 367 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 CNPP09543 421 aaKnown RBP20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 LIG1P18858 919 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 NPTX2P47972 431 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 PEX3P56589 373 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 DCAF4L1Q3SXM0 396 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 APBB1IPQ7Z5R6 666 aaPredicted RBP20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 GPR65Q8IYL9 337 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 RPGRIP1Q96KN7 1286 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 KIFC3Q9BVG8 833 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 RUSC1Q9BVN2 902 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 APOL5Q9BWW9 433 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 TMEM134Q9H6X4 195 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 KCNG1Q9UIX4 513 aa20.54■□□□□ 0.88
CHMP1A-207ENST00000549328 FAM86C2PA6NEL3 165 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 CCDC169A6NNP5 214 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 EDN1P05305 212 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 SSBP05455 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 EPCAMP16422 314 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 PDCP20941 246 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 GUCY2CP25092 1073 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 KLRC2P26717 231 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 MTHFRP42898 656 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 DMP1Q13316 513 aaPredicted RBP20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 TUSC3Q13454 348 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 NT5DC1Q5TFE4 455 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 ATF7IP2Q5U623 682 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 KIAA0319Q5VV43 1072 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 EEF1DP3Q658K8 133 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 SYT2Q8N9I0 419 aaPredicted RBP20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 RIPOR3Q96MK2 946 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 PNMA5Q96PV4 448 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 NTPCRQ9BSD7 190 aaKnown RBP20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 BACH2Q9BYV9 841 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 CHST7Q9NS84 486 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 SNTG2Q9NY99 539 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 KCND2Q9NZV8 630 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 ARHGAP28Q9P2N2 729 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 MUTYHQ9UIF7 546 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 TNFSF13BQ9Y275 285 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 USP20Q9Y2K6 914 aa20.53■□□□□ 0.88
CHMP1A-207ENST00000549328 RECQL4O94761 1208 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 THP07101 528 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 GLUD2P49448 558 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 CLCN4P51793 760 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 DSG1Q02413 1049 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 MAPK7Q13164 816 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 TAS1R1Q7RTX1 841 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 CABP7Q86V35 215 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms