RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 IKBKBO14920 756 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 SLC16A3O15427 465 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ZNF623O75123 536 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 CLTAP09496 248 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 EPB41P11171 864 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 PROZP22891 400 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 RGS19P49795 217 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ZNF165P49910 485 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 YARSP54577 528 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 MYL5Q02045 173 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 PPP2R3AQ06190 1150 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 DPCR1Q3MIW9 517 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ISM2Q6H9L7 571 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 KLHL10Q6JEL2 608 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 SLC24A5Q71RS6 500 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 XXYLT1Q8NBI6 393 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ENOX1Q8TC92 643 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 HPS3Q969F9 1004 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 TRIM43Q96BQ3 446 aaPredicted RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ZNF668Q96K58 619 aaPredicted RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 MSTO1Q9BUK6 570 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 TARS2Q9BW92 718 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 PDZD7Q9H5P4 517 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ELAC1Q9H777 363 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 METTL14Q9HCE5 456 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 RGS18Q9NS28 235 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 ANKFY1Q9P2R3 1169 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 MAGEC2Q9UBF1 373 aaPredicted RBP10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 CTNND2Q9UQB3 1225 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 SCN5AQ14524 2016 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 RALGAPA2Q2PPJ7 1873 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 A0A0B4J269 797 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 A0A0U1RQF3 1178 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 ZNF233A6NK53 670 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 XPOTO43592 962 aaKnown RBP10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 EXTL3O43909 919 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 STX10O60499 249 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 NBNO60934 754 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 IL18RAPO95256 599 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 AMHP03971 560 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 NR3C1P04150 777 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 KRT13P13646 458 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 BMP6P22004 513 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 NR2F2P24468 414 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 HOXA11P31270 313 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 GRM5P41594 1212 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 KCNJ6P48051 423 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 SPAG1Q07617 926 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 DSC3Q14574 896 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 ANO6Q4KMQ2 910 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 ZCWPW2Q504Y3 356 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 SPATA1Q5VX52 437 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 FILIP1Q7Z7B0 1213 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 NT5DC4Q86YG4 428 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 SMYD4Q8IYR2 804 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 GPD1LQ8N335 351 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 CSGALNACT2Q8N6G5 542 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 DBF4BQ8NFT6 615 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 FAM200AQ8TCP9 573 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 SCLYQ96I15 445 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 ADAM2Q99965 735 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 FUCA2Q9BTY2 467 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 THAP9Q9H5L6 903 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 AGO3Q9H9G7 860 aaKnown RBP10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 PLEKHA5Q9HAU0 1116 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 PTPRHQ9HD43 1115 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 HSPBP1Q9NZL4 362 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 MAPK8IP1Q9UQF2 711 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 GIT1Q9Y2X7 761 aa10.65□□□□□ -0.7
SMARCD1-206ENST00000549274 TTC3P53804 2025 aa10.65□□□□□ -0.71
SMARCD1-206ENST00000549274 TET1Q8NFU7 2136 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 B4GALT5O43286 388 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 TGFB1I1O43294 461 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 EXOC3O60645 756 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 NPTXRO95502 500 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 FGBP02675 491 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 CSF2RAP15509 400 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 AP3M2P53677 418 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 ADAM9Q13443 819 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 MBTPS1Q14703 1052 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 TTI2Q6NXR4 508 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 INTS8Q75QN2 995 aaKnown RBP10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 DEFB128Q7Z7B8 93 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 NPAS4Q8IUM7 802 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 ZC3H3Q8IXZ2 948 aaKnown RBP10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 ABI1Q8IZP0 508 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 CPB2Q96IY4 423 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 ACAP3Q96P50 834 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 CDT1Q9H211 546 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 RPF1Q9H9Y2 349 aaKnown RBP10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 DMAC2Q9NW81 257 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 TMEM161AQ9NX61 479 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 KANSL3Q9P2N6 904 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms