RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TAX1BP1Q86VP1 789 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 STRA6Q9BX79 667 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 TDRD3Q9H7E2 651 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CTNNAL1Q9UBT7 734 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 SLC12A4Q9UP95 1085 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 PFASO15067 1338 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 ATP6V1G2O95670 118 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 HSPA6P17066 643 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 STAT2P52630 851 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 CLUL1Q15846 466 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 EPC2Q52LR7 807 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 ACER1Q8TDN7 264 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 N4BP2L2Q92802 583 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 NOCTQ9UK39 431 aaKnown RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 TMEM150BA6NC51 233 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 TP73O15350 636 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 ITIH4Q14624 930 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 TRIP13Q15645 432 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 RBM26Q5T8P6 1007 aaKnown RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 BTNL9Q6UXG8 535 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 RNF207Q6ZRF8 634 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 FMNL3Q8IVF7 1028 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 DYDC1Q8WWB3 177 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 KREMEN1Q96MU8 473 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 CDC42EP4Q9H3Q1 356 aaKnown RBP15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 NOD2Q9HC29 1040 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 FGFR1OP2Q9NVK5 253 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 PARP2Q9UGN5 583 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 USP21Q9UK80 565 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 ZBTB21Q9ULJ3 1066 aa15.18■□□□□ 0.02
RAPGEF3-218ENST00000548919 NF2P35240 595 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 CHKAP35790 457 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 SLMAPQ14BN4 828 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 ZYXQ15942 572 aaKnown RBP15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 INTS8Q75QN2 995 aaKnown RBP15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 CCDC63Q8NA47 563 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 PWWP2AQ96N64 755 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 IDI2Q9BXS1 227 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 TMEM117Q9H0C3 514 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 AAASQ9NRG9 546 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 TCP11X1B4DZS4 312 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 IPO5O00410 1097 aaKnown RBP15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 RFX1P22670 979 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 CETN1Q12798 172 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 TNFAIP8L3Q5GJ75 292 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 PHLDB2Q86SQ0 1253 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 CCDC50Q8IVM0 306 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 HSPBP1Q9NZL4 362 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 MTUS1Q9ULD2 1270 aa15.17■□□□□ 0.02
RAPGEF3-218ENST00000548919 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 UBOX5O94941 541 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 FMO1Q01740 532 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ADCY1Q08828 1119 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 CALCOCO2Q13137 446 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 RASA3Q14644 834 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 CYP1B1Q16678 543 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ACCSLQ4AC99 568 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ANKRD42Q8N9B4 389 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 SEMA4DQ92854 862 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 NRXN2Q9P2S2 1712 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 TMEM120BA0PK00 339 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ECEL1O95672 775 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 GH1P01241 217 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 RPSAP08865 295 aaKnown RBP15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ELF1P32519 619 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 MXI1P50539 228 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 KCNJ2P63252 427 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 KRT17Q04695 432 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 MIGA2Q7L4E1 593 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 KCTD17Q8N5Z5 321 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 GDAP1Q8TB36 358 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 ARHGEF2Q92974 986 aaKnown RBP15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 CCDC127Q96BQ5 260 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 TMEM109Q9BVC6 243 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 TAOK3Q9H2K8 898 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 CCDC134Q9H6E4 229 aa15.16■□□□□ 0.02
RAPGEF3-218ENST00000548919 SNX3O60493 162 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 GGPS1O95749 300 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 ADRB2P07550 413 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 SEPT14Q6ZU15 432 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 TAOK1Q7L7X3 1001 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 FAM71AQ8IYT1 594 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 DHX38Q92620 1227 aaKnown RBP15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 FAM84AQ96KN4 292 aa15.15■□□□□ 0.02
RAPGEF3-218ENST00000548919 CSRNP1Q96S65 589 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms