RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 HES2Q9Y543 173 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 HCFC2Q9Y5Z7 792 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 K7ERI5 159 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 SLC26A4O43511 780 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
BEST3-209ENST00000548658 NPTXRO95502 500 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 PRKCBP05771 671 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 COL9A1P20849 921 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 OR1G1P47890 313 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 AFF1P51825 1210 aaKnown RBP12.56□□□□□ -0.4
BEST3-209ENST00000548658 DSC1Q08554 894 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 GRIK3Q13003 919 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
BEST3-209ENST00000548658 ECM1Q16610 540 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 LLGL2Q6P1M3 1020 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 ELMSAN1Q6PJG2 1045 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 CDK5RAP3Q96JB5 506 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 ZFP42Q96MM3 310 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 APOL6Q9BWW8 343 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 S1PR5Q9H228 398 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 NXF3Q9H4D5 531 aaKnown RBP12.56□□□□□ -0.4
BEST3-209ENST00000548658 DZANK1Q9NVP4 752 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 KCND2Q9NZV8 630 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 DPP7Q9UHL4 492 aa12.56□□□□□ -0.4
BEST3-209ENST00000548658 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
BEST3-209ENST00000548658 PRR33A8MZF0 331 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 E9PMD0 336 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 SOD2P04179 222 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 URODP06132 367 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 AKAP5P24588 427 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 SCNN1GP51170 649 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 RBM10P98175 930 aaKnown RBP12.55□□□□□ -0.4
BEST3-209ENST00000548658 PTPN14Q15678 1187 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 IL17AQ16552 155 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 DCAF4L1Q3SXM0 396 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 HYIQ5T013 277 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 KIAA1841Q6NSI8 718 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 GPR65Q8IYL9 337 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 GSTCDQ8NEC7 633 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
BEST3-209ENST00000548658 LRFN3Q9BTN0 628 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 ADAM7Q9H2U9 754 aa12.55□□□□□ -0.4
BEST3-209ENST00000548658 VWA3AA6NCI4 1184 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 LOC730098B7Z3J9 87 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 B4GALT3O60512 393 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 C1RP00736 705 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 LIG1P18858 919 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 KLRC2P26717 231 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 CDC25AP30304 524 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 MTHFRP42898 656 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 SMTNP53814 917 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 PEX3P56589 373 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 CUL4AQ13619 759 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 HERC4Q5GLZ8 1057 aaPredicted RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 RINT1Q6NUQ1 792 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 C1orf186Q6ZWK4 172 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 CABP7Q86V35 215 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 CDR2LQ86X02 465 aaPredicted RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 RIPOR3Q96MK2 946 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 PDZD7Q9H5P4 517 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 TMEM134Q9H6X4 195 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 MIOSQ9NXC5 875 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 PRG3Q9Y2Y8 225 aaPredicted RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
BEST3-209ENST00000548658 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
BEST3-209ENST00000548658 PP2D1A8MPX8 630 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 LILRB3O75022 631 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 HIP1RO75146 1068 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 THP07101 528 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 ADH1AP07327 375 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 GUCY2CP25092 1073 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 UBA7P41226 1012 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 NPTX2P47972 431 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 GLUD2P49448 558 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 CREMQ03060 361 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 TUSC3Q13454 348 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 ZRSR1Q15695 479 aaKnown RBP12.53□□□□□ -0.4
BEST3-209ENST00000548658 USP41Q3LFD5 358 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 RNF168Q8IYW5 571 aaPredicted RBP12.53□□□□□ -0.4
BEST3-209ENST00000548658 SYT2Q8N9I0 419 aaPredicted RBP12.53□□□□□ -0.4
BEST3-209ENST00000548658 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 AUTS2Q8WXX7 1259 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 CALML4Q96GE6 196 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 KLHL5Q96PQ7 755 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 VN1R3Q9BXE9 311 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms