RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 CASP5P51878 434 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 SMTNP53814 917 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 UBE3AQ05086 875 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 STK4Q13043 487 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 GPM6BQ13491 265 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 KCNB1Q14721 858 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 HERC4Q5GLZ8 1057 aaPredicted RBP12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 FAM26FQ5R3K3 315 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 MRPL38Q96DV4 380 aaKnown RBP12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 CASD1Q96PB1 797 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 IKZF4Q9H2S9 585 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 TMEM134Q9H6X4 195 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
TUBA1C-203ENST00000548470 LAMA2P24043 3122 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 K7ERI5 159 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 ACKR2O00590 384 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 N4BP3O15049 544 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 LPXNO60711 386 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 LINC00271P0C7V0 271 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 MYBP10242 640 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 ZNF131P52739 623 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 DMP1Q13316 513 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 AMHR2Q16671 573 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 SPOUT1Q5T280 376 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 KLHL10Q6JEL2 608 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 SLC27A1Q6PCB7 646 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 LRRC43Q8N309 656 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 KCNN1Q92952 543 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 TRIM6Q9C030 488 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 TYW1Q9NV66 732 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 ANO10Q9NW15 660 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 RMND1Q9NWS8 449 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 STK39Q9UEW8 545 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 MTUS1Q9ULD2 1270 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-203ENST00000548470 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 RFXAPO00287 272 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 SLC16A4O15374 487 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 NCK2O43639 380 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 FGFR1P11362 822 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PLS3P13797 630 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 GAP43P17677 238 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 ARF4P18085 180 aaPredicted RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PPM1AP35813 382 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PRCPP42785 496 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 NPTX2P47972 431 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PEX3P56589 373 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PRPF4BQ13523 1007 aaKnown RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PAN2Q504Q3 1202 aaKnown RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 ZC2HC1CQ53FD0 456 aaPredicted RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 NOMO2Q5JPE7 1267 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 UBXN11Q5T124 520 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 TRIML1Q8N9V2 468 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 RNF169Q8NCN4 708 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 SLC17A8Q8NDX2 589 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 URGCPQ8TCY9 931 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 CCDC47Q96A33 483 aaKnown RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 FIZ1Q96SL8 496 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 RBSNQ9H1K0 784 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PARVGQ9HBI0 331 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 KMT5AQ9NQR1 393 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 RNF19AQ9NV58 838 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PUF60Q9UHX1 559 aaKnown RBP12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 LZTS1Q9Y250 596 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 GIT1Q9Y2X7 761 aa12.84□□□□□ -0.35
TUBA1C-203ENST00000548470 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 K7ENM7 598 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 INPPL1O15357 1258 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 OFD1O75665 1012 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 PRPF6O94906 941 aaKnown RBP12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 PRKCBP05771 671 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 ITGA4P13612 1032 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 ALDH7A1P49419 539 aaKnown RBP12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 STX17P56962 302 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 PLCB3Q01970 1234 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 KRT17Q04695 432 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 KCNA1Q09470 495 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 TIGD5Q53EQ6 642 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 CLLU1OSQ5K130 101 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 NELFCDQ8IXH7 590 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 FAM178BQ8IXR5 827 aa12.83□□□□□ -0.36
TUBA1C-203ENST00000548470 PPP2R3CQ969Q6 453 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms