RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TRIM49BA6NDI0 452 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 FGFR1P11362 822 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 ATP1A3P13637 1013 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 PLS3P13797 630 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 ARF4P18085 180 aaPredicted RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 CDK11BP21127 795 aaKnown RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 FANCCQ00597 558 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 DMP1Q13316 513 aaPredicted RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 CDKAL1Q5VV42 579 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 FOXR2Q6PJQ5 311 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 SLC24A5Q71RS6 500 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 EPM2AIP1Q7L775 607 aaPredicted RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 NPAS4Q8IUM7 802 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 NOC3LQ8WTT2 800 aaKnown RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 SCFD1Q8WVM8 642 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 LPPQ93052 612 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 RAD9AQ99638 391 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 EIF2AQ9BY44 585 aaKnown RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 CCDC113Q9H0I3 377 aa19.03■□□□□ 0.64
HDAC7-227ENST00000548080 TTYH1Q9H313 450 aaPredicted RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 LARSQ9P2J5 1176 aaKnown RBP19.03■□□□□ 0.64
HDAC7-227ENST00000548080 GCNT3O95395 438 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 MAPTP10636 758 aaKnown RBP19.02■□□□□ 0.63
HDAC7-227ENST00000548080 ATF7P17544 494 aaPredicted RBP19.02■□□□□ 0.63
HDAC7-227ENST00000548080 TMEM132AQ24JP5 1023 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 UBXN11Q5T124 520 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 PPP2R2DQ66LE6 453 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 STXBP4Q6ZWJ1 553 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 TAS1R3Q7RTX0 852 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 ECHDC2Q86YB7 292 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 FAM178BQ8IXR5 827 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 CRIPAKQ8N1N5 446 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 TSG101Q99816 390 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 DUSP9Q99956 384 aaKnown RBP19.02■□□□□ 0.63
HDAC7-227ENST00000548080 NFKBIZQ9BYH8 718 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 C2orf40Q9H1Z8 148 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 C1orf112Q9NSG2 853 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 MTUS1Q9ULD2 1270 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 PCDHB7Q9Y5E2 793 aa19.02■□□□□ 0.63
HDAC7-227ENST00000548080 MYO9BQ13459 2157 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 MEIS3P2A8K0S8 358 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 EIF3DO15371 548 aaKnown RBP eCLIP19.01■□□□□ 0.63
HDAC7-227ENST00000548080 MYBP10242 640 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 NMT1P30419 496 aaKnown RBP19.01■□□□□ 0.63
HDAC7-227ENST00000548080 CASP5P51878 434 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 HTRA4P83105 476 aaPredicted RBP19.01■□□□□ 0.63
HDAC7-227ENST00000548080 LRRC63Q05C16 580 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 BMT2Q1RMZ1 405 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 ZNF720Q7Z2F6 126 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 ZNF507Q8TCN5 953 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 FIZ1Q96SL8 496 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 SRRTQ9BXP5 876 aaKnown RBP19.01■□□□□ 0.63
HDAC7-227ENST00000548080 FZD8Q9H461 694 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 SLC28A3Q9HAS3 691 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 CHST12Q9NRB3 414 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 PRMT7Q9NVM4 692 aaPredicted RBP19.01■□□□□ 0.63
HDAC7-227ENST00000548080 HCSTQ9UBK5 93 aa19.01■□□□□ 0.63
HDAC7-227ENST00000548080 FNDC1Q4ZHG4 1894 aaPredicted RBP19■□□□□ 0.63
HDAC7-227ENST00000548080 PRPF6O94906 941 aaKnown RBP19■□□□□ 0.63
HDAC7-227ENST00000548080 SERPINC1P01008 464 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 STAG3L1P0CL83 205 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 FAM189BP81408 668 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 MAPK6Q16659 721 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 HSP90AA4PQ58FG1 418 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 ZNF697Q5TEC3 545 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 NELFCDQ8IXH7 590 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 CSGALNACT2Q8N6G5 542 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 THAP9Q9H5L6 903 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 C17orf75Q9HAS0 396 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 FAM105AQ9NUU6 356 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 RNF19AQ9NV58 838 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 IFNKQ9P0W0 207 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 ARHGAP28Q9P2N2 729 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 INSL6Q9Y581 213 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 PCDHB13Q9Y5F0 798 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 UBE4BO95155 1302 aa19■□□□□ 0.63
HDAC7-227ENST00000548080 CHD7Q9P2D1 2997 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 LINC01553A4QN01 128 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 K7ENM7 598 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 K7ERI5 159 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 CBFA2T2O43439 604 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 DGKIO75912 1065 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 NPTXRO95502 500 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 FGFR1OPO95684 399 aaKnown RBP18.99■□□□□ 0.63
HDAC7-227ENST00000548080 TAP1Q03518 808 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 SPAG1Q07617 926 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 PRPF4BQ13523 1007 aaKnown RBP18.99■□□□□ 0.63
HDAC7-227ENST00000548080 ALCAMQ13740 583 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 KNOP1Q1ED39 458 aaKnown RBP18.99■□□□□ 0.63
HDAC7-227ENST00000548080 EEF1DP3Q658K8 133 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 DEFB123Q8N688 67 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 SLC17A8Q8NDX2 589 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 TMEM161BQ8NDZ6 487 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 MRFAP1L1Q96HT8 127 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 APOL6Q9BWW8 343 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 KCTD10Q9H3F6 313 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 ZNF576Q9H609 170 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 RC3H2Q9HBD1 1191 aaKnown RBP18.99■□□□□ 0.63
HDAC7-227ENST00000548080 TMEM161AQ9NX61 479 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 HES2Q9Y543 173 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms