RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 POLR3BQ9NW08 1133 aaPredicted RBP3.28□□□□□ -1.88
CEP290-204ENST00000547926 VWA7Q9Y334 891 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 PPP2R3BQ9Y5P8 575 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 PRSS38A1L453 326 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 KDM1AO60341 852 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 LSP1P33241 339 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 BPIFB4P59827 614 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 FKBP15Q5T1M5 1219 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 GPR158Q5T848 1215 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 LHFPL2Q6ZUX7 228 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 CMIPQ8IY22 773 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 AFAP1L2Q8N4X5 818 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 CLRN3Q8NCR9 226 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 CHAC2Q8WUX2 184 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 TTC1Q99614 292 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 NOL10Q9BSC4 688 aaKnown RBP3.28□□□□□ -1.89
CEP290-204ENST00000547926 SPATA5L1Q9BVQ7 753 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 ANO3Q9BYT9 981 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 IFT22Q9H7X7 185 aa3.28□□□□□ -1.89
CEP290-204ENST00000547926 USP36Q9P275 1121 aaKnown RBP3.28□□□□□ -1.89
CEP290-204ENST00000547926 MYPNQ86TC9 1320 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 PFKMP08237 780 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 ZNF81P51508 661 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 MANFP55145 182 aaKnown RBP3.27□□□□□ -1.89
CEP290-204ENST00000547926 ESPNLQ6ZVH7 1005 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 CLEC14AQ86T13 490 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 LYSMD2Q8IV50 215 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 GCDHQ92947 438 aaPredicted RBP3.27□□□□□ -1.89
CEP290-204ENST00000547926 GFM2Q969S9 779 aaKnown RBP3.27□□□□□ -1.89
CEP290-204ENST00000547926 FDXACB1Q9BRP7 624 aaPredicted RBP3.27□□□□□ -1.89
CEP290-204ENST00000547926 VTA1Q9NP79 307 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 IL23AQ9NPF7 189 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 TOPORSQ9NS56 1045 aaPredicted RBP3.27□□□□□ -1.89
CEP290-204ENST00000547926 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.27□□□□□ -1.89
CEP290-204ENST00000547926 TMPRSS11EQ9UL52 423 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 USP18Q9UMW8 372 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 INSL6Q9Y581 213 aa3.27□□□□□ -1.89
CEP290-204ENST00000547926 LRRC3CA6NJW4 275 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 H2AFYO75367 372 aaKnown RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 C1QL1O75973 258 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 TOX4O94842 621 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 CFBP00751 764 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 VIL1P09327 827 aaKnown RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 SOX5P35711 763 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 SEC24CP53992 1094 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 TCIRG1Q13488 830 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 TRIM25Q14258 630 aaKnown RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 FAM214AQ32MH5 1076 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 CT47A1Q5JQC4 288 aaPredicted RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 FRMD7Q6ZUT3 714 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 MDGA1Q8NFP4 955 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 FERMT2Q96AC1 680 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 TEX101Q9BY14 249 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 PCDHB6Q9Y5E3 794 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 MGST3O14880 152 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 ZEB2O60315 1214 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 RAB11FIP3O75154 756 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 EYA4O95677 639 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 CNGA1P29973 690 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 CD69Q07108 199 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 STAT4Q14765 748 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 CT83Q5H943 113 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 PITRM1Q5JRX3 1037 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 RASSF3Q86WH2 238 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 PLA2G15Q8NCC3 412 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 GAB3Q8WWW8 586 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 SLC7A6OSQ96CW6 309 aaPredicted RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 ZNF512Q96ME7 567 aaPredicted RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 SLC6A15Q9H2J7 730 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 EDARQ9UNE0 448 aa3.26□□□□□ -1.89
CEP290-204ENST00000547926 NOC2LQ9Y3T9 749 aaKnown RBP3.26□□□□□ -1.89
CEP290-204ENST00000547926 ST20-MTHFSA0A0A6YYL1 179 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.25□□□□□ -1.89
CEP290-204ENST00000547926 GOLGA6L6A8MZA4 724 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 CLSTN1O94985 981 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 LPLP06858 475 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 LAG3P18627 525 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 SESN2P58004 480 aaPredicted RBP3.25□□□□□ -1.89
CEP290-204ENST00000547926 TMPRSS15P98073 1019 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 SLC41A1Q8IVJ1 513 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 LILRA3Q8N6C8 439 aaPredicted RBP3.25□□□□□ -1.89
CEP290-204ENST00000547926 CDYL2Q8N8U2 506 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 PIK3C3Q8NEB9 887 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 HIST1H2AHQ96KK5 128 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 HIST1H2AJQ99878 128 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 TCF25Q9BQ70 676 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 EVLQ9UI08 416 aaPredicted RBP3.25□□□□□ -1.89
CEP290-204ENST00000547926 NCR1O76036 304 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 IGLV2-14P01704 120 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 GAAP10253 952 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 USP14P54578 494 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 PPARAQ07869 468 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 KRT26Q7Z3Y9 468 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 SUPT20HQ8NEM7 779 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 PPP1R14CQ8TAE6 165 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 LINC00476Q8WZB0 136 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 LPPQ93052 612 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 ZBTB9Q96C00 473 aa3.25□□□□□ -1.89
CEP290-204ENST00000547926 EAF2Q96CJ1 260 aaPredicted RBP3.25□□□□□ -1.89
CEP290-204ENST00000547926 ING3Q9NXR8 418 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms