RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 MYH9P35579 1960 aaKnown RBP11.98□□□□□ -0.49
CUX1-212ENST00000547394 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 MAFGO15525 162 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 FAM153BP0C7A2 387 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 CHRNB2P17787 502 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 NF2P35240 595 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 BIRC3Q13489 604 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 FAM153CQ494X1 144 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 WDR93Q6P2C0 686 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 CCNI2Q6ZMN8 369 aaPredicted RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 RIOX2Q8IUF8 465 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 CHST13Q8NET6 341 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 DEPTORQ8TB45 409 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 EPB41L5Q9HCM4 733 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 FAM153AQ9UHL3 310 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 EXOC7Q9UPT5 735 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 FAN1Q9Y2M0 1017 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 MCM3APO60318 1980 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 A0A0G2JLL6 359 aaPredicted RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 CFHP08603 1231 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 EPHX2P34913 555 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 TNFSF9P41273 254 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 STAT5BP51692 787 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 KRT39Q6A163 491 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 PRRT2Q7Z6L0 340 aaPredicted RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 MCPH1Q8NEM0 835 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 PRPF31Q8WWY3 499 aaKnown RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 SLC7A3Q8WY07 619 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 FGD4Q96M96 766 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 CTTNBP2NLQ9P2B4 639 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 NFU1Q9UMS0 254 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 UMODL1Q5DID0 1318 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 K7ERI5 159 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 HEXIM1O94992 359 aaKnown RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 ALCAMQ13740 583 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 PASD1Q8IV76 773 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 EPS8L1Q8TE68 723 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
CUX1-212ENST00000547394 TCHPQ9BT92 498 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 RAB20Q9NX57 234 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 ARHGAP28Q9P2N2 729 aa11.97□□□□□ -0.49
CUX1-212ENST00000547394 PAPPA2Q9BXP8 1791 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 WDR81Q562E7 1941 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 NFASCO94856 1347 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 RAD51CO43502 376 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 CAPSQ13938 189 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 DCAF12L1Q5VU92 463 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 NT5DC3Q86UY8 548 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 TXLNBQ8N3L3 684 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 HELQQ8TDG4 1101 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 KRT35Q92764 455 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 CELF4Q9BZC1 486 aaKnown RBP11.96□□□□□ -0.49
CUX1-212ENST00000547394 TRIM31Q9BZY9 425 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 TRIM7Q9C029 511 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 PNMA2Q9UL42 364 aa11.96□□□□□ -0.49
CUX1-212ENST00000547394 NOP56O00567 594 aaKnown RBP11.96□□□□□ -0.5
CUX1-212ENST00000547394 SOCS7O14512 581 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 PRLRP16471 622 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 STRN3Q13033 797 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 MESDQ14696 234 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 KIF22Q14807 665 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 C12orf56Q8IXR9 622 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 SAMD3Q8N6K7 520 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 FBXL13Q8NEE6 735 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 RDM1Q8NG50 284 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 OR5B17Q8NGF7 314 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 IWS1Q96ST2 819 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 NTPCRQ9BSD7 190 aaKnown RBP11.96□□□□□ -0.5
CUX1-212ENST00000547394 STIM2Q9P246 746 aa11.96□□□□□ -0.5
CUX1-212ENST00000547394 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.5
CUX1-212ENST00000547394 NOC2LQ9Y3T9 749 aaKnown RBP11.96□□□□□ -0.5
CUX1-212ENST00000547394 TDRD10Q5VZ19 366 aaKnown RBP11.95□□□□□ -0.5
CUX1-212ENST00000547394 USP38Q8NB14 1042 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
CUX1-212ENST00000547394 DNERQ8NFT8 737 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 ALG3Q92685 438 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 NLRP4Q96MN2 994 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 FNBP1Q96RU3 617 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 MSTO1Q9BUK6 570 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 SBF1O95248 1867 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 ZNF233A6NK53 670 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 GGCXP38435 758 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 PPATQ06203 517 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 MOGSQ13724 837 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
CUX1-212ENST00000547394 CPA5Q8WXQ8 436 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 RFFLQ8WZ73 363 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 RPGRIP1Q96KN7 1286 aa11.95□□□□□ -0.5
CUX1-212ENST00000547394 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms