RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FILIP1LQ4L180 1135 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 INTS8Q75QN2 995 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 UBE2Q1Q7Z7E8 422 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 FAM228AQ86W67 206 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 IRF2BP1Q8IU81 584 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 FAM186BQ8IYM0 893 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 FBXL18Q96ME1 805 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 PDZD7Q9H5P4 517 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 PIN4Q9Y237 131 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 ZNF233A6NK53 670 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 CBFA2T2O43439 604 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 EDN1P05305 212 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 GHRP10912 638 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 FGFR4P22455 802 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 ENPEPQ07075 957 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 NFX1Q12986 1120 aaKnown RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 LPIN1Q14693 890 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 SNRNP35Q16560 246 aaKnown RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 LRRC26Q2I0M4 334 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 SARM1Q6SZW1 724 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 CREBRFQ8IUR6 639 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 CPB2Q96IY4 423 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 ZBTB45Q96K62 511 aaPredicted RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 TMEM39AQ9NV64 488 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 LIMA1Q9UHB6 759 aaKnown RBP17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 ST3GAL5Q9UNP4 418 aa17.26■□□□□ 0.35
TRAFD1-203ENST00000547063 CENPFP49454 3210 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 LRRC10BA6NIK2 292 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 TTLL13PA6NNM8 815 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 ABLIM1O14639 778 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 AKAP3O75969 853 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 TRAF7Q6Q0C0 670 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 ZBTB33Q86T24 672 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 EEF2KMTQ96G04 330 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 TUBGCP2Q9BSJ2 902 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 CDT1Q9H211 546 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 ERVK-5Q9HDB9 667 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 USP20Q9Y2K6 914 aa17.25■□□□□ 0.35
TRAFD1-203ENST00000547063 STX10O60499 249 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 CLTAP09496 248 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 HARSP12081 509 aaKnown RBP17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 ATP1A3P13637 1013 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 CD52P31358 61 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 RFC2P35250 354 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 CASP4P49662 377 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 RAB27AP51159 221 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 FANCCQ00597 558 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 KRT31Q15323 416 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 SURF1Q15526 300 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 EEF1DP3Q658K8 133 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 TWF2Q6IBS0 349 aaKnown RBP17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 HACE1Q8IYU2 909 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 APBB2Q92870 758 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 SAAL1Q96ER3 474 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 FAM213AQ9BRX8 229 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 FTHL17Q9BXU8 183 aa17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAFD1-203ENST00000547063 TANC1Q9C0D5 1861 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 GOLGA8IPA6NC78 632 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 GOLGA8JA6NMD2 632 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 SKIP12755 728 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 UBASH3AP57075 661 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 BFSP1Q12934 665 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 TRIM59Q8IWR1 403 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 TMC2Q8TDI7 906 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 ABHD8Q96I13 439 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 MFSD14AQ96MC6 490 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 HTATIP2Q9BUP3 242 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 IFIH1Q9BYX4 1025 aaKnown RBP17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 TRIM5Q9C035 493 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 HAPLN2Q9GZV7 340 aa17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 AGO3Q9H9G7 860 aaKnown RBP17.23■□□□□ 0.35
TRAFD1-203ENST00000547063 KIAA0355O15063 1070 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 NPTXRO95502 500 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 GRM5P41594 1212 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 ACOT2P49753 483 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 VAMP7P51809 220 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 MCCD1P59942 119 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 CYP24A1Q07973 514 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 CDR2LQ86X02 465 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 CBWD2Q8IUF1 395 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 CD302Q8IX05 232 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 THNSL1Q8IYQ7 743 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 SEPT8Q92599 483 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 BORCS6Q96GS4 357 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 PPP1R12CQ9BZL4 782 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms