RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 TCF25Q9BQ70 676 aa16.88■□□□□ 0.29
SSH1-204ENST00000546697 KIFC3Q9BVG8 833 aa16.88■□□□□ 0.29
SSH1-204ENST00000546697 TRIM6Q9C030 488 aaPredicted RBP16.88■□□□□ 0.29
SSH1-204ENST00000546697 TLE6Q9H808 572 aa16.88■□□□□ 0.29
SSH1-204ENST00000546697 MIOSQ9NXC5 875 aa16.88■□□□□ 0.29
SSH1-204ENST00000546697 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
SSH1-204ENST00000546697 TNFRSF10AO00220 468 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 NRP1O14786 923 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 NPTXRO95502 500 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 ALDH2P05091 517 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 DDIT3P35638 169 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 NRIP1P48552 1158 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 NCKAP1LP55160 1127 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 RNASELQ05823 741 aaKnown RBP16.87■□□□□ 0.29
SSH1-204ENST00000546697 SMAD4Q13485 552 aaKnown RBP16.87■□□□□ 0.29
SSH1-204ENST00000546697 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
SSH1-204ENST00000546697 ATF7IP2Q5U623 682 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 EEF1DP3Q658K8 133 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 PTCRAQ6ISU1 281 aaPredicted RBP16.87■□□□□ 0.29
SSH1-204ENST00000546697 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 VN1R2Q8NFZ6 395 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 RAD54LQ92698 747 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 ZFP42Q96MM3 310 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 ADPGKQ9BRR6 497 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 MARCH5Q9NX47 278 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
SSH1-204ENST00000546697 STK17AQ9UEE5 414 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 FAM50BQ9Y247 325 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 INPP5FQ9Y2H2 1132 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 MYH15Q9Y2K3 1946 aa16.87■□□□□ 0.29
SSH1-204ENST00000546697 TDRD15B5MCY1 1934 aaKnown RBP16.86■□□□□ 0.29
SSH1-204ENST00000546697 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 HIDE1A8MVS5 230 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 PTGESO14684 152 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 LINC01565O15544 149 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 MBTPS2O43462 519 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 PAPLNO95428 1278 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
SSH1-204ENST00000546697 PLCG1P19174 1290 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 SCNN1GP51170 649 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 LONRF3Q496Y0 759 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 ALKAL1Q6UXT8 129 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 ZPBP2Q6X784 338 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 CDR2LQ86X02 465 aaPredicted RBP16.86■□□□□ 0.29
SSH1-204ENST00000546697 LINC00301Q8NCQ3 95 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 FIZ1Q96SL8 496 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 MRPL4Q9BYD3 311 aaKnown RBP16.86■□□□□ 0.29
SSH1-204ENST00000546697 ST6GALNAC4Q9H4F1 302 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 POLD4Q9HCU8 107 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 KMT5AQ9NQR1 393 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
SSH1-204ENST00000546697 NT5C1B-RDH14C9J2C7 533 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 H0YCG3 227 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 H3BQ06 376 aaPredicted RBP16.85■□□□□ 0.29
SSH1-204ENST00000546697 PPP6R2O75170 966 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 YEATS4O95619 227 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 POMCP01189 267 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 PIGRP01833 764 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 SOD2P04179 222 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 AKAP5P24588 427 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 GRM5P41594 1212 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 KARSQ15046 597 aaKnown RBP16.85■□□□□ 0.29
SSH1-204ENST00000546697 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 USP49Q70CQ1 688 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 TMC7Q7Z402 723 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 APBB1IPQ7Z5R6 666 aaPredicted RBP16.85■□□□□ 0.29
SSH1-204ENST00000546697 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 SUSD6Q92537 303 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 LARP4BQ92615 738 aaKnown RBP16.85■□□□□ 0.29
SSH1-204ENST00000546697 EPSTI1Q96J88 318 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 CHST7Q9NS84 486 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 CD207Q9UJ71 328 aa16.85■□□□□ 0.29
SSH1-204ENST00000546697 TCF20Q9UGU0 1960 aaKnown RBP16.85■□□□□ 0.29
SSH1-204ENST00000546697 TOM1L1O75674 476 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 RECQL4O94761 1208 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 MCF2P10911 925 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 IL9P15248 144 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 HOXB8P17481 243 aaPredicted RBP16.84■□□□□ 0.29
SSH1-204ENST00000546697 ABCD1P33897 745 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 SMTNP53814 917 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 TUSC3Q13454 348 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
SSH1-204ENST00000546697 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 KRI1Q8N9T8 703 aaKnown RBP16.84■□□□□ 0.29
SSH1-204ENST00000546697 MICAL1Q8TDZ2 1067 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 FAM193BQ96PV7 902 aaPredicted RBP16.84■□□□□ 0.29
SSH1-204ENST00000546697 REEP2Q9BRK0 252 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 HERC2P3Q9BVR0 1158 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 CDT1Q9H211 546 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 S1PR5Q9H228 398 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 MYH11P35749 1972 aa16.84■□□□□ 0.29
SSH1-204ENST00000546697 CCDC169A6NNP5 214 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 TMEM189-UBE2V1I3L0A0 370 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 CLASP2O75122 1294 aaKnown RBP16.83■□□□□ 0.28
SSH1-204ENST00000546697 ZSCAN22P10073 491 aaPredicted RBP16.83■□□□□ 0.28
SSH1-204ENST00000546697 MARCKSP29966 332 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms