RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 PROZP22891 400 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 MATR3P43243 847 aaKnown RBP eCLIP11.05□□□□□ -0.64
CIT-218ENST00000546026 POLR2FP61218 127 aaKnown RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 DLG4P78352 724 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 CLDN10P78369 228 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 MYL7Q01449 175 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 POU5F1Q01860 360 aaKnown RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.64
CIT-218ENST00000546026 SURF1Q15526 300 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 CBWD6Q4V339 395 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 CBWD3Q5JTY5 395 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 CBWD5Q5RIA9 395 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 E4F1Q66K89 784 aaPredicted RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 CCAR2Q8N163 923 aaKnown RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 C7orf31Q8N865 590 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 PLEKHO2Q8TD55 490 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 TCHPQ9BT92 498 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 INO80BQ9C086 356 aaPredicted RBP11.05□□□□□ -0.64
CIT-218ENST00000546026 TMEM8AQ9HCN3 771 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 SIX2Q9NPC8 291 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 XPNPEP3Q9NQH7 507 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 GCNT4Q9P109 453 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 COQ4Q9Y3A0 265 aa11.05□□□□□ -0.64
CIT-218ENST00000546026 MYADML2A6NDP7 307 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 LRRIQ3A6PVS8 624 aaPredicted RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 ABLIM1O14639 778 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 PGK1P00558 417 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 RPLP2P05387 115 aaKnown RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 UCHL3P15374 230 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 MXI1P50539 228 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 AP3M2P53677 418 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 NLRP11P59045 1033 aaKnown RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 HTRA3P83110 453 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 PPP3CAQ08209 521 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 AMHR2Q16671 573 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 KYAT1Q16773 422 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 EPC2Q52LR7 807 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 SFMBT2Q5VUG0 894 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 KRT39Q6A163 491 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 CCSAPQ6IQ19 270 aaPredicted RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 TRIM65Q6PJ69 517 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 RAD9BQ6WBX8 426 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 RRAGAQ7L523 313 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 FMNL3Q8IVF7 1028 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 CCDC170Q8IYT3 715 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 PCSK9Q8NBP7 692 aaKnown RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 LMO3Q8TAP4 145 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 ZNF296Q8WUU4 475 aaPredicted RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 TMEM117Q9H0C3 514 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 ADAMTS10Q9H324 1103 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 MINDY3Q9H8M7 445 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 AIPL1Q9NZN9 384 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 DDX20Q9UHI6 824 aaKnown RBP11.04□□□□□ -0.64
CIT-218ENST00000546026 CNTNAP2Q9UHC6 1331 aa11.04□□□□□ -0.64
CIT-218ENST00000546026 GOLGA6L9A6NEM1 432 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 SOWAHDA6NJG2 315 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 LRRC53A6NM62 1247 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 TREHO43280 583 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 FAM189A1O60320 539 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 GPR32O75388 356 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 CABYRO75952 493 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 TUBB4AP04350 444 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 MCF2P10911 925 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 ACTN1P12814 892 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 CYLC1P35663 651 aaPredicted RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 GCLMP48507 274 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 ACOT2P49753 483 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 NCBP1Q09161 790 aaKnown RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 HIC1Q14526 733 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 TAF2Q6P1X5 1199 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 BRSK2Q8IWQ3 736 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 C17orf53Q8N3J3 647 aaPredicted RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 ZNF668Q96K58 619 aaPredicted RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 SCLT1Q96NL6 688 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 FNBP1Q96RU3 617 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 CHP1Q99653 195 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 NLRC4Q9NPP4 1024 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 RBAKQ9NYW8 714 aaPredicted RBP11.03□□□□□ -0.64
CIT-218ENST00000546026 ANKFY1Q9P2R3 1169 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 APEX2Q9UBZ4 518 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 GTF2IRD1Q9UHL9 959 aa11.03□□□□□ -0.64
CIT-218ENST00000546026 CPSF3Q9UKF6 684 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms