RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 FBXO25Q8TCJ0 367 aa16.81■□□□□ 0.28
SCAP-215ENST00000545718 TATDN2Q93075 761 aa16.81■□□□□ 0.28
SCAP-215ENST00000545718 NT5C1BQ96P26 610 aa16.81■□□□□ 0.28
SCAP-215ENST00000545718 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
SCAP-215ENST00000545718 TRPC6Q9Y210 931 aa16.81■□□□□ 0.28
SCAP-215ENST00000545718 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
SCAP-215ENST00000545718 TCRBV7S2A1N4TA0A589 114 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 H0YGN5 161 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 SF3A3Q12874 501 aaKnown RBP eCLIP16.8■□□□□ 0.282e-8■■■■■ 52.3
SCAP-215ENST00000545718 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 CCDC25Q86WR0 208 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 PARD3BQ8TEW8 1205 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 ZSWIM1Q9BR11 485 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 FAM213AQ9BRX8 229 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 KIAA1683Q9H0B3 1180 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 NFS1Q9Y697 457 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 ZNF646O15015 1829 aaPredicted RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 PYGMP11217 842 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 JAK3P52333 1124 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 LRIG3Q6UXM1 1119 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 ARFGAP2Q8N6H7 521 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 PCDHA10Q9Y5I2 948 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 ATP8B3O60423 1300 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 SYNGAP1Q96PV0 1343 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 P4HA2O15460 535 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 KIAA0754O94854 1291 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 NR3C2P08235 984 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 MAPTP10636 758 aaKnown RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 CYP11B1P15538 503 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 SSTR3P32745 418 aaPredicted RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 KRT76Q01546 638 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 PTGISQ16647 500 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 RNF187Q5TA31 235 aaPredicted RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 CYFIP1Q7L576 1253 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 FAM71AQ8IYT1 594 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 EPN3Q9H201 632 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 RASAL2Q9UJF2 1139 aa16.8■□□□□ 0.28
SCAP-215ENST00000545718 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
SCAP-215ENST00000545718 FMO1Q01740 532 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 NBPF12Q5TAG4 269 aaPredicted RBP16.79■□□□□ 0.28
SCAP-215ENST00000545718 CCDC137Q6PK04 289 aaKnown RBP16.79■□□□□ 0.28
SCAP-215ENST00000545718 PRELID2Q8N945 189 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 EIF1ADQ8N9N8 165 aaKnown RBP16.79■□□□□ 0.28
SCAP-215ENST00000545718 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 TMEM51Q9NW97 253 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 NOCTQ9UK39 431 aaKnown RBP16.79■□□□□ 0.28
SCAP-215ENST00000545718 TTC7AQ9ULT0 858 aaPredicted RBP16.79■□□□□ 0.28
SCAP-215ENST00000545718 A6NNZ2 444 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 MIF4GDA9UHW6 222 aaKnown RBP16.79■□□□□ 0.28
SCAP-215ENST00000545718 NCKAP1LP55160 1127 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 TUBB8Q3ZCM7 444 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 SV2AQ7L0J3 742 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 CCT8L2Q96SF2 557 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 PGAP2Q9UHJ9 254 aa16.79■□□□□ 0.28
SCAP-215ENST00000545718 ZNF862O60290 1169 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 SHBGP04278 402 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 KCNA3P22001 575 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 SNX1Q13596 522 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 MTERF2Q49AM1 385 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 NLRP14Q86W24 1093 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 C12orf56Q8IXR9 622 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 ZNF473Q8WTR7 871 aaKnown RBP16.78■□□□□ 0.28
SCAP-215ENST00000545718 PPM1EQ8WY54 764 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 MOV10L1Q9BXT6 1211 aaKnown RBP16.78■□□□□ 0.28
SCAP-215ENST00000545718 CNOT8Q9UFF9 292 aaKnown RBP16.78■□□□□ 0.28
SCAP-215ENST00000545718 PFASO15067 1338 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 VWA5AO00534 786 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 SFNP31947 248 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 HMGCS2P54868 508 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 TNFAIP1Q13829 316 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 DUPD1Q68J44 220 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 C11orf63Q6NUN7 778 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 OTUD6AQ7L8S5 288 aa16.78■□□□□ 0.28
SCAP-215ENST00000545718 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
SCAP-215ENST00000545718 PHF2O75151 1096 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 LYPLA2O95372 231 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 TNNI1P19237 187 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 SLCO1A2P46721 670 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 BIRC3Q13489 604 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 PRKG1Q13976 671 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 TTC31Q49AM3 519 aaPredicted RBP16.77■□□□□ 0.28
SCAP-215ENST00000545718 LLGL2Q6P1M3 1020 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 TTC27Q6P3X3 843 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 MAP4K3Q8IVH8 894 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 SHC3Q92529 594 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 CEP89Q96ST8 783 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 TMEM8AQ9HCN3 771 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 ADGRA3Q8IWK6 1321 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 CCND2P30279 289 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 B4GALNT4Q76KP1 1039 aa16.77■□□□□ 0.28
SCAP-215ENST00000545718 TADA2BQ86TJ2 420 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms