RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SOX5P35711 763 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 INHBEP58166 350 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
SNHG1-224ENST00000545688 SDE2Q6IQ49 451 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 LRRC55Q6ZSA7 311 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 CMIPQ8IY22 773 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 PROKR1Q8TCW9 393 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 FAM193BQ96PV7 902 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-224ENST00000545688 AGAP2Q99490 1192 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 SPON1Q9HCB6 807 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 GPRC5DQ9NZD1 345 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 DMRT1Q9Y5R6 373 aa6.65□□□□□ -1.34
SNHG1-224ENST00000545688 FOXN1O15353 648 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 ITGB1P05556 798 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 MASP1P48740 699 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 FAM189BP81408 668 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 CDK17Q00537 523 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 TGFBRAP1Q8WUH2 860 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 CHAC2Q8WUX2 184 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 ZNF480Q8WV37 535 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 TRPM5Q9NZQ8 1165 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 HS3ST4Q9Y661 456 aa6.64□□□□□ -1.35
SNHG1-224ENST00000545688 TMEM191CA6NGB0 347 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 ADCY6O43306 1168 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 ABHD16AO95870 558 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 CCT2P78371 535 aaKnown RBP6.63□□□□□ -1.35
SNHG1-224ENST00000545688 FSTL1Q12841 308 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 SMN1Q16637 294 aaKnown RBP6.63□□□□□ -1.35
SNHG1-224ENST00000545688 LY6G5CQ5SRR4 150 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 PRAMEF14Q5SWL7 426 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 LAIR1Q6GTX8 287 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 KCNV1Q6PIU1 500 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 BTNL9Q6UXG8 535 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 SYT12Q8IV01 421 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 VRK3Q8IV63 474 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 AFAP1L2Q8N4X5 818 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 OR10H5Q8NGA6 315 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 TSPEARQ8WU66 669 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 PAWRQ96IZ0 340 aaKnown RBP6.63□□□□□ -1.35
SNHG1-224ENST00000545688 SLC46A2Q9BY10 475 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 CLCA2Q9UQC9 943 aa6.63□□□□□ -1.35
SNHG1-224ENST00000545688 RPTORQ8N122 1335 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 B5MCH6 92 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 BRINP1O60477 761 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 GASTP01350 101 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 CRHR1P34998 444 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
SNHG1-224ENST00000545688 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 TIGD2Q4W5G0 525 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 CT47A1Q5JQC4 288 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-224ENST00000545688 MFSD14BQ5SR56 506 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 IQSEC1Q6DN90 963 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 GDF7Q7Z4P5 450 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 RNF169Q8NCN4 708 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 LMBR1Q8WVP7 490 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 QRSL1Q9H0R6 528 aaKnown RBP6.62□□□□□ -1.35
SNHG1-224ENST00000545688 CHST2Q9Y4C5 530 aa6.62□□□□□ -1.35
SNHG1-224ENST00000545688 GOLGA8AA7E2F4 631 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 MRPS9P82933 396 aaKnown RBP6.61□□□□□ -1.35
SNHG1-224ENST00000545688 TMPRSS15P98073 1019 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 NHLH2Q02577 135 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 STAT4Q14765 748 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 PTPAQ15257 358 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 MST1LQ2TV78 715 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 MBNL2Q5VZF2 373 aaKnown RBP6.61□□□□□ -1.35
SNHG1-224ENST00000545688 DRICH1Q6PGQ1 229 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-224ENST00000545688 LHFPL2Q6ZUX7 228 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 PDZD4Q76G19 769 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-224ENST00000545688 REPS2Q8NFH8 660 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 AUTS2Q8WXX7 1259 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 RIN2Q8WYP3 895 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-224ENST00000545688 DCLRE1CQ96SD1 692 aaKnown RBP6.61□□□□□ -1.35
SNHG1-224ENST00000545688 TEX101Q9BY14 249 aa6.61□□□□□ -1.35
SNHG1-224ENST00000545688 CENPVL1A0A0U1RR11 272 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 TBKBP1A7MCY6 615 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 AKR1B10O60218 316 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 LPXNO60711 386 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 PPFIA4O75335 1185 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 NCR1O76036 304 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 ZSCAN20P17040 1043 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-224ENST00000545688 LAG3P18627 525 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 ADSLP30566 484 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-224ENST00000545688 SCAND1P57086 179 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 COL10A1Q03692 680 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 EFCAB12Q6NXP0 572 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 MYEOVQ96EZ4 313 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 ORAI2Q96SN7 254 aa6.6□□□□□ -1.35
SNHG1-224ENST00000545688 POLR2AP24928 1970 aaKnown RBP6.6□□□□□ -1.35
SNHG1-224ENST00000545688 RNASET2O00584 256 aaKnown RBP6.59□□□□□ -1.35
SNHG1-224ENST00000545688 ZNF185O15231 689 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 PHF2O75151 1096 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 EYA4O95677 639 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 FLT3LGP49771 235 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 ADRM1Q16186 407 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 BMT2Q1RMZ1 405 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 MUM1Q2TAK8 710 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms