RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FAM204AQ9H8W3 233 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 DTLQ9NZJ0 730 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 WASF3Q9UPY6 502 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 PCDHGB6Q9Y5F9 930 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 CDY2AQ9Y6F7 541 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 CCDC88BA6NC98 1476 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 POLA1P09884 1462 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-222ENST00000545308 SNAPC4Q5SXM2 1469 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 SUV39H1O43463 412 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 LAMTOR5O43504 91 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 B4GALT3O60512 393 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ZNF28P17035 718 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 STAT5AP42229 794 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ALDH5A1P51649 535 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-222ENST00000545308 SLC16A1P53985 500 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 PPARAQ07869 468 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ADAM9Q13443 819 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 SPIDRQ14159 915 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ADRM1Q16186 407 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 PGS1Q32NB8 556 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 FAM83BQ5T0W9 1011 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ERAP2Q6P179 960 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 TEPPQ6URK8 271 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 CCDC149Q6ZUS6 474 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 GAREM2Q75VX8 874 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 C11orf96Q7Z7L8 435 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 KIAA0319LQ8IZA0 1049 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.12□□□□□ -1.596e-32■□□□□ 8.9
SNHG1-222ENST00000545308 OR14C36Q8NHC7 312 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 TOE1Q96GM8 510 aaKnown RBP5.12□□□□□ -1.59
SNHG1-222ENST00000545308 SORCS2Q96PQ0 1159 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 B3GNT5Q9BYG0 378 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 PITHD1Q9GZP4 211 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-222ENST00000545308 BHMT2Q9H2M3 363 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 MTG2Q9H4K7 406 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 HSPBP1Q9NZL4 362 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 PPP4R1LQ9P1A2 415 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 FNIP2Q9P278 1114 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ARHGAP28Q9P2N2 729 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 PUF60Q9UHX1 559 aaKnown RBP5.12□□□□□ -1.59
SNHG1-222ENST00000545308 EVLQ9UI08 416 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-222ENST00000545308 SCOCQ9UIL1 159 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 L1RE1Q9UN81 338 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ERCC6L2Q5T890 1561 aa5.12□□□□□ -1.59
SNHG1-222ENST00000545308 ZNF839A8K0R7 811 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 FAM227AF5H4B4 570 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 EIF5BO60841 1220 aaKnown RBP5.11□□□□□ -1.59
SNHG1-222ENST00000545308 OPHN1O60890 802 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 C6P13671 934 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 WASP42768 502 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 ECE1P42892 770 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 BCAR1P56945 870 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 NKX3-2P78367 333 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 PFKPQ01813 784 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 MALLQ13021 153 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 SEMA5AQ13591 1074 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 CDSNQ15517 529 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 LONRF1Q17RB8 773 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 KIAA0753Q2KHM9 967 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 GRAMD1BQ3KR37 738 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 SWSAP1Q6NVH7 229 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 XRRA1Q6P2D8 792 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 NPNTQ6UXI9 565 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 SPRED1Q7Z699 444 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 PLEKHH3Q7Z736 793 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 SRLQ86TD4 932 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 SKAP1Q86WV1 359 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 COL23A1Q86Y22 540 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-222ENST00000545308 SH3RF3Q8TEJ3 882 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-222ENST00000545308 RSAD2Q8WXG1 361 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 DPF2Q92785 391 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 CGRRF1Q99675 332 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 DMRT3Q9NQL9 472 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 INCENPQ9NQS7 918 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 USP18Q9UMW8 372 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 POLHQ9Y253 713 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 TSC22D4Q9Y3Q8 395 aa5.11□□□□□ -1.59
SNHG1-222ENST00000545308 A0A0A6YYJ9 748 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 KDM6BO15054 1643 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 PQBP1O60828 265 aaKnown RBP5.1□□□□□ -1.59
SNHG1-222ENST00000545308 DTNBO60941 627 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 FOSP01100 380 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-222ENST00000545308 CYP1A1P04798 512 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-222ENST00000545308 TACR2P21452 398 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 HTR1BP28222 390 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 MCAMP43121 646 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 TM4SF4P48230 202 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 AGFG1P52594 562 aaKnown RBP5.1□□□□□ -1.59
SNHG1-222ENST00000545308 AK2P54819 239 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 FAM193AP78312 1265 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 DSC2Q02487 901 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 PPP3CAQ08209 521 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 IL10RAQ13651 578 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 ICAM4Q14773 271 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 TMED8Q6PL24 325 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-222ENST00000545308 VPS37AQ8NEZ2 397 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 OR2I1PQ8NGU4 316 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 GAB3Q8WWW8 586 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 FATE1Q969F0 183 aa5.1□□□□□ -1.59
SNHG1-222ENST00000545308 MBD6Q96DN6 1003 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms