RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 LCMT1Q9UIC8 334 aa13.41□□□□□ -0.26
PAAF1-215ENST00000544909 PARP14Q460N5 1801 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 CCDC169A6NNP5 214 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 BACH1O14867 736 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 CCT5P48643 541 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 PEX3P56589 373 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 DLG4P78352 724 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
PAAF1-215ENST00000544909 PTGISQ16647 500 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.4□□□□□ -0.26
PAAF1-215ENST00000544909 JAMLQ86YT9 394 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 ARHGEF19Q8IW93 802 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 ALG3Q92685 438 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 P3H4Q92791 437 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
PAAF1-215ENST00000544909 SEPT11Q9NVA2 429 aaKnown RBP13.4□□□□□ -0.26
PAAF1-215ENST00000544909 TAS2R14Q9NYV8 317 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 PCDHA3Q9Y5H8 950 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 DOCK1Q14185 1865 aa13.4□□□□□ -0.26
PAAF1-215ENST00000544909 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 VWA5AO00534 786 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 CYP11B1P15538 503 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 RXRBP28702 533 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ADSSP30520 456 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 SLC1A1P43005 524 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 CXCL9Q07325 125 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 DHX9Q08211 1270 aaKnown RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PTP4A2Q12974 167 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 SPP2Q13103 211 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PDCLQ13371 301 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ARHGEF16Q5VV41 709 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 SLC30A10Q6XR72 485 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TADA2BQ86TJ2 420 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 FER1L6Q2WGJ9 1857 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 MYO1FO00160 1098 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 SLC16A4O15374 487 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 CCNE2O96020 404 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ADRB2P07550 413 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PSAPP07602 524 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 CHRNB2P17787 502 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 KCNA3P22001 575 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 RWDD2BP57060 319 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TGFB2P61812 414 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PPP2R2AP63151 447 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 FMO1Q01740 532 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TRADDQ15628 312 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TRIM72Q6ZMU5 477 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 GPD1LQ8N335 351 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PPM1KQ8N3J5 372 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 RDH13Q8NBN7 331 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ZNF564Q8TBZ8 553 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PLEKHO2Q8TD55 490 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 SLC20A1Q8WUM9 679 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TLCD1Q96CP7 247 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 KREMEN1Q96MU8 473 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TAAR1Q96RJ0 339 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 NEUROG2Q9H2A3 272 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PCIF1Q9H4Z3 704 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 HOMER3Q9NSC5 361 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 PPME1Q9Y570 386 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 FAM169AQ9Y6X4 670 aa13.39□□□□□ -0.27
PAAF1-215ENST00000544909 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 C19orf81C9J6K1 198 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 PIGRP01833 764 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 EIF2AK2P19525 551 aaKnown RBP13.38□□□□□ -0.27
PAAF1-215ENST00000544909 GNPTABQ3T906 1256 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 KCTD16Q68DU8 428 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 ACAD10Q6JQN1 1059 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 ANO5Q75V66 913 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.38□□□□□ -0.27
PAAF1-215ENST00000544909 PRELID2Q8N945 189 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 UBLCP1Q8WVY7 318 aaPredicted RBP13.38□□□□□ -0.27
PAAF1-215ENST00000544909 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 VCPIP1Q96JH7 1222 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 IFT74Q96LB3 600 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 ZNF112Q9UJU3 913 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms