RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 POU5F1BQ06416 359 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 NCBP1Q09161 790 aaKnown RBP18.01■□□□□ 0.47
DDX55-212ENST00000544738 TFDP1Q14186 410 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 ST3GAL2Q16842 350 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 SUMF1Q8NBK3 374 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 BMP2KQ9NSY1 1161 aaPredicted RBP18.01■□□□□ 0.47
DDX55-212ENST00000544738 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 CHD8Q9HCK8 2581 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 CACNA1IQ9P0X4 2223 aa18■□□□□ 0.47
DDX55-212ENST00000544738 MAP1BP46821 2468 aaKnown RBP18■□□□□ 0.47
DDX55-212ENST00000544738 WNT7AO00755 349 aa18■□□□□ 0.47
DDX55-212ENST00000544738 N4BP1O75113 896 aaKnown RBP18■□□□□ 0.47
DDX55-212ENST00000544738 ERLIN2O94905 339 aa18■□□□□ 0.47
DDX55-212ENST00000544738 SSBP05455 408 aaKnown RBP eCLIP18■□□□□ 0.47
DDX55-212ENST00000544738 ATP2B1P20020 1258 aa18■□□□□ 0.47
DDX55-212ENST00000544738 AXLP30530 894 aa18■□□□□ 0.47
DDX55-212ENST00000544738 MCM7P33993 719 aa18■□□□□ 0.47
DDX55-212ENST00000544738 RBM25P49756 843 aaKnown RBP18■□□□□ 0.47
DDX55-212ENST00000544738 LONRF3Q496Y0 759 aa18■□□□□ 0.47
DDX55-212ENST00000544738 NOMO2Q5JPE7 1267 aa18■□□□□ 0.47
DDX55-212ENST00000544738 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
DDX55-212ENST00000544738 FBXO18Q8NFZ0 1043 aa18■□□□□ 0.47
DDX55-212ENST00000544738 GPR152Q8TDT2 470 aa18■□□□□ 0.47
DDX55-212ENST00000544738 IGSF21Q96ID5 467 aa18■□□□□ 0.47
DDX55-212ENST00000544738 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
DDX55-212ENST00000544738 MINDY3Q9H8M7 445 aa18■□□□□ 0.47
DDX55-212ENST00000544738 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
DDX55-212ENST00000544738 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
DDX55-212ENST00000544738 SDHBP21912 280 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 PTENP60484 403 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 RNASELQ05823 741 aaKnown RBP17.99■□□□□ 0.47
DDX55-212ENST00000544738 GNL2Q13823 731 aaKnown RBP17.99■□□□□ 0.47
DDX55-212ENST00000544738 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 VARS2Q5ST30 1063 aaKnown RBP17.99■□□□□ 0.47
DDX55-212ENST00000544738 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 MRPL10Q7Z7H8 261 aaKnown RBP17.99■□□□□ 0.47
DDX55-212ENST00000544738 CNNM3Q8NE01 707 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 LPPQ93052 612 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 KLHL5Q96PQ7 755 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 KIF2CQ99661 725 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 TMEM60Q9H2L4 133 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 TUFT1Q9NNX1 390 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 DLGAP2Q9P1A6 1054 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 KANSL3Q9P2N6 904 aa17.99■□□□□ 0.47
DDX55-212ENST00000544738 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 POTEMA6NI47 508 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 OFD1O75665 1012 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 GALTP07902 379 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 MYBP10242 640 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 SRFP11831 508 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 HOXA11P31270 313 aaPredicted RBP17.98■□□□□ 0.47
DDX55-212ENST00000544738 RARRES1P49788 294 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 CLCN4P51793 760 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 PHLDB3Q6NSJ2 640 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 POTEGQ6S5H5 508 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
DDX55-212ENST00000544738 ERMNQ8TAM6 284 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 URGCPQ8TCY9 931 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 BCL7CQ8WUZ0 217 aaPredicted RBP17.98■□□□□ 0.47
DDX55-212ENST00000544738 GBP3Q9H0R5 595 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 UBN1Q9NPG3 1134 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 TBC1D13Q9NVG8 400 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 INPP5FQ9Y2H2 1132 aa17.98■□□□□ 0.47
DDX55-212ENST00000544738 CCDC195A0A1B0GUA6 201 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 DCDC2BA2VCK2 349 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 CNPP09543 421 aaKnown RBP17.97■□□□□ 0.47
DDX55-212ENST00000544738 ARL2P36404 184 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 TRAPPC10P48553 1259 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 NOTUMQ6P988 496 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 NOSTRINQ8IVI9 506 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 PIGOQ8TEQ8 1089 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 CCDC51Q96ER9 411 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 CHAMP1Q96JM3 812 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 NACC1Q96RE7 527 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 MYADMQ96S97 322 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 POLR3CQ9BUI4 534 aaPredicted RBP17.97■□□□□ 0.47
DDX55-212ENST00000544738 NFKBIZQ9BYH8 718 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 FOXQ1Q9C009 403 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 NRDE2Q9H7Z3 1164 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 RSAD1Q9HA92 442 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 ARHGEF3Q9NR81 526 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 STK39Q9UEW8 545 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 CDV3Q9UKY7 258 aaKnown RBP17.97■□□□□ 0.47
DDX55-212ENST00000544738 NOL7Q9UMY1 257 aaKnown RBP17.97■□□□□ 0.47
DDX55-212ENST00000544738 ARID2Q68CP9 1835 aa17.97■□□□□ 0.47
DDX55-212ENST00000544738 MEIS3P2A8K0S8 358 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 INO80B-WBP1J3KQ70 363 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 LRRN2O75325 713 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 OR52Z1P0C646 297 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 SPATA31C1P0DKV0 1188 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 GLULP15104 373 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 NCLP19338 710 aaKnown RBP17.96■□□□□ 0.47
DDX55-212ENST00000544738 ZNF174Q15697 407 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 UBXN11Q5T124 520 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 DCLRE1AQ6PJP8 1040 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 AGMOQ6ZNB7 445 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 CATSPER3Q86XQ3 398 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 MCPH1Q8NEM0 835 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms