RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 ZNF571Q7Z3V5 609 aaPredicted RBP13.82□□□□□ -0.2
PAAF1-214ENST00000544552 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 USP6NLQ92738 828 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 SECISBP2LQ93073 1101 aaKnown RBP13.82□□□□□ -0.2
PAAF1-214ENST00000544552 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 TARS2Q9BW92 718 aaKnown RBP13.82□□□□□ -0.2
PAAF1-214ENST00000544552 MRPL4Q9BYD3 311 aaKnown RBP13.82□□□□□ -0.2
PAAF1-214ENST00000544552 GPR88Q9GZN0 384 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 SUCLA2Q9P2R7 463 aaPredicted RBP13.82□□□□□ -0.2
PAAF1-214ENST00000544552 CDC23Q9UJX2 597 aa13.82□□□□□ -0.2
PAAF1-214ENST00000544552 BTNL10A8MVZ5 291 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 EVI5O60447 810 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 ZC3H11AO75152 810 aaKnown RBP eCLIP13.81□□□□□ -0.2
PAAF1-214ENST00000544552 TOM1L1O75674 476 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 C22orf31O95567 290 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 INSRRP14616 1297 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 SMPD1P17405 629 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 NAB2Q15742 525 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 MAPK6Q16659 721 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
PAAF1-214ENST00000544552 EFCAB12Q6NXP0 572 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
PAAF1-214ENST00000544552 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 SV2AQ7L0J3 742 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 RNF149Q8NC42 400 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 FBXL13Q8NEE6 735 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 FAM81BQ96LP2 452 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 INTUQ9ULD6 942 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 NENFQ9UMX5 172 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 TFR2Q9UP52 801 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 DUSP10Q9Y6W6 482 aa13.81□□□□□ -0.2
PAAF1-214ENST00000544552 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
PAAF1-214ENST00000544552 H3BRB1 525 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 TACC1O75410 805 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 AMPD2Q01433 879 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 KIF22Q14807 665 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 PAPD7Q5XG87 772 aaKnown RBP13.8□□□□□ -0.2
PAAF1-214ENST00000544552 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
PAAF1-214ENST00000544552 LRRC71Q8N4P6 559 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 LINC01465Q8N7H1 131 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 SYT11Q9BT88 431 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
PAAF1-214ENST00000544552 HAPLN2Q9GZV7 340 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 FZD8Q9H461 694 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
PAAF1-214ENST00000544552 ZFYVE28Q9HCC9 887 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
PAAF1-214ENST00000544552 RAB20Q9NX57 234 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 NAGPAQ9UK23 515 aa13.8□□□□□ -0.2
PAAF1-214ENST00000544552 EFCAB8A8MWE9 144 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ACKR2O00590 384 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 CLDN3O15551 220 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 CA12O43570 354 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MMP3P08254 477 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 KLRC1P26715 233 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MFAP3P55082 362 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 PTENP60484 403 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 TUBB4BP68371 445 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 DGKDQ16760 1214 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 OLFML2BQ68BL8 750 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ALKBH5Q6P6C2 394 aaKnown RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MNS1Q8NEH6 495 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ZBTB45Q96K62 511 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 FNBP1Q96RU3 617 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 POP1Q99575 1024 aaKnown RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MSTO1Q9BUK6 570 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 JRKLQ9Y4A0 524 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 DOCK3Q8IZD9 2030 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MACROD2A1Z1Q3 448 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 FOXN3O00409 490 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 IGHA2P01877 340 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 C4BPAP04003 597 aaKnown RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 EDN1P05305 212 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 PRKCBP05771 671 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 PRLRP16471 622 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 TMOD1P28289 359 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 AP3M2P53677 418 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 NLRP11P59045 1033 aaKnown RBP13.79□□□□□ -0.2
PAAF1-214ENST00000544552 MCL1Q07820 350 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 WHAMMP3Q1A5X7 153 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 KIAA0753Q2KHM9 967 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ZACNQ401N2 412 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 TSHZ1Q6ZSZ6 1077 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ENOSF1Q7L5Y1 443 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 TRAPPC11Q7Z392 1133 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 RHPN2Q8IUC4 686 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 OR6J1Q8NGC5 347 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
PAAF1-214ENST00000544552 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms