RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CMTR2Q8IYT2 770 aaKnown RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 MIER2Q8N344 545 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 D2HGDHQ8N465 521 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 PPM1NQ8N819 430 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 HDAC10Q969S8 669 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 COA7Q96BR5 231 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 MIEF2Q96C03 454 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 HOOK2Q96ED9 719 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 TMEM176AQ96HP8 235 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 CDK5RAP1Q96SZ6 601 aaKnown RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 C7orf25Q9BPX7 421 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 C1QTNF3Q9BXJ4 246 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 DEF6Q9H4E7 631 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 MANSC1Q9H8J5 431 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 METTL14Q9HCE5 456 aaKnown RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 DMRT3Q9NQL9 472 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 AASDHPPTQ9NRN7 309 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 DNM3Q9UQ16 869 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 ANKRD6Q9Y2G4 727 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 GIT1Q9Y2X7 761 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 LUC7L2Q9Y383 392 aaKnown RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 SH3BP1Q9Y3L3 701 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 TCAF1Q9Y4C2 921 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 B5MCH6 92 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 HTRA2O43464 458 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 AKAP10O43572 662 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 SGTAO43765 313 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 RFPL1O75677 317 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 ZRANB2O95218 330 aaKnown RBP eCLIP3.1□□□□□ -1.91
YBX3-214ENST00000544501 RPLP2P05387 115 aaKnown RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 U2AF1L5P0DN76 240 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 IL2RBP14784 551 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 GNAT2P19087 354 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 ACO1P21399 889 aaKnown RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 GUCY1A2P33402 732 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 FLT3LGP49771 235 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 PER3P56645 1201 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 U2AF1Q01081 240 aaKnown RBP eCLIP3.1□□□□□ -1.91
YBX3-214ENST00000544501 KIF23Q02241 960 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 APBA1Q02410 837 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 SP140Q13342 867 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 SEPT2Q15019 361 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 FAM47AQ5JRC9 791 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 PRAMEF14Q5SWL7 426 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 PPP4R3AQ6IN85 833 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 MIGA2Q7L4E1 593 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 ZNF572Q7Z3I7 529 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 FAM83AQ86UY5 434 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 TRMT2AQ8IZ69 625 aaKnown RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 PQLC1Q8N2U9 271 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 MDGA1Q8NFP4 955 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 NRG4Q8WWG1 115 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 CASKIN2Q8WXE0 1202 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 ST8SIA2Q92186 375 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 DVL3Q92997 716 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 HSPBAP1Q96EW2 488 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 CDH19Q9H159 772 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 LANCL2Q9NS86 450 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 AURKAIP1Q9NWT8 199 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 MOCS1Q9NZB8 636 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 INTUQ9ULD6 942 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 PNMA8BQ9ULN7 279 aaPredicted RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 CLCA2Q9UQC9 943 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 THRAP3Q9Y2W1 955 aaKnown RBP3.1□□□□□ -1.91
YBX3-214ENST00000544501 TESMINQ9Y4I5 508 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 IPPQ9Y573 584 aa3.1□□□□□ -1.91
YBX3-214ENST00000544501 PJA2O43164 708 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 TEX33O43247 280 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 IL33O95760 270 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 POU2F2P09086 479 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 HSP90B1P14625 803 aaKnown RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 ALOX15P16050 662 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 ZSCAN20P17040 1043 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 EDNRBP24530 442 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 SLC6A9P48067 706 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 RAB27AP51159 221 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 PTH1RQ03431 593 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 PRKD1Q15139 912 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 ELAVL1Q15717 326 aaKnown RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 NFE2Q16621 373 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 DCAF17Q5H9S7 520 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 SPTY2D1Q68D10 685 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 NAIF1Q69YI7 327 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 DRICH1Q6PGQ1 229 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 HTR3DQ70Z44 454 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 GPRIN1Q7Z2K8 1008 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 SGMS1Q86VZ5 419 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 GSPT2Q8IYD1 628 aaKnown RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 OR2I1PQ8NGU4 316 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 DPF2Q92785 391 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 C8orf49Q96NF6 230 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 UHRF1Q96T88 793 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 RHOBTB2Q9BYZ6 727 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 SENP6Q9GZR1 1112 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 KLC2Q9H0B6 622 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 EPC1Q9H2F5 836 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 TMEM140Q9NV12 185 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 FAM30AQ9NZY2 134 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms