RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TTI1O43156 1089 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 CPB1P15086 417 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 CHRNA3P32297 505 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 COPB2P35606 906 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 RGS7P49802 495 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 EFNA5P52803 228 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 ENOSF1Q7L5Y1 443 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 TTC30BQ8N4P2 665 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 CYTH2Q99418 400 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 CYP26B1Q9NR63 512 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 HACD3Q9P035 362 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 TPX2Q9ULW0 747 aaKnown RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 SNX9Q9Y5X1 595 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 A0A1B0GTH6 734 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 RECQLP46063 649 aaPredicted RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 KIF19Q2TAC6 998 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 EFHC2Q5JST6 749 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 EDEM3Q9BZQ6 932 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 RHOBTB3O94955 611 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 BEND6Q5SZJ8 279 aaPredicted RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 SPATA4Q8NEY3 305 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 FAM151AQ8WW52 585 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 SLC13A1Q9BZW2 595 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 ROR1Q01973 937 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 DMTNQ08495 405 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 KDELC2Q7Z4H8 507 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 CCNYL1Q8N7R7 359 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 HAUS8Q9BT25 410 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 TAF1DQ9H5J8 278 aaPredicted RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 PARVAQ9NVD7 372 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 DCTN4Q9UJW0 460 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 MRFAP1Q9Y605 127 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 CLTCQ00610 1675 aaKnown RBP13.59□□□□□ -0.23
CHD4-211ENST00000544484 CHEK2O96017 543 aa13.59□□□□□ -0.23
CHD4-211ENST00000544484 A0A087WUV0 522 aaPredicted RBP13.58□□□□□ -0.23
CHD4-211ENST00000544484 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.23
CHD4-211ENST00000544484 PAPOLAP51003 745 aaKnown RBP13.58□□□□□ -0.23
CHD4-211ENST00000544484 IZUMO3Q5VZ72 239 aa13.58□□□□□ -0.23
CHD4-211ENST00000544484 WDR75Q8IWA0 830 aaKnown RBP13.58□□□□□ -0.23
CHD4-211ENST00000544484 RNF217Q8TC41 542 aa13.58□□□□□ -0.23
CHD4-211ENST00000544484 TRIM55Q9BYV6 548 aa13.58□□□□□ -0.23
CHD4-211ENST00000544484 APEX2Q9UBZ4 518 aa13.58□□□□□ -0.23
CHD4-211ENST00000544484 HPCAL4Q9UM19 191 aa13.58□□□□□ -0.23
CHD4-211ENST00000544484 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.23
CHD4-211ENST00000544484 BRAFP15056 766 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 SLC9A1P19634 815 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 FMO5P49326 533 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 TTC30AQ86WT1 665 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 SYT2Q8N9I0 419 aaPredicted RBP13.58□□□□□ -0.24
CHD4-211ENST00000544484 GTSE1Q9NYZ3 720 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 UCHL3P15374 230 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 KLK7P49862 253 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 KRT33BQ14525 404 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
CHD4-211ENST00000544484 SNRNP35Q16560 246 aaKnown RBP13.58□□□□□ -0.24
CHD4-211ENST00000544484 ANGPTL8Q6UXH0 198 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 TRAIPQ9BWF2 469 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 KCNF1Q9H3M0 494 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 HPS5Q9UPZ3 1129 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 SRGNP10124 158 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 TAC1P20366 129 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 NCAPHQ15003 741 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 TRIM72Q6ZMU5 477 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 ATXN7L3BQ96GX2 97 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 MRPL46Q9H2W6 279 aaKnown RBP13.58□□□□□ -0.24
CHD4-211ENST00000544484 DONSONQ9NYP3 566 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 GALCP54803 685 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 NPEPPSP55786 919 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 FBXO28Q9NVF7 368 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 FHOD1Q9Y613 1164 aa13.58□□□□□ -0.24
CHD4-211ENST00000544484 RTN2O75298 545 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 MYBL1P10243 752 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 ARSEP51690 589 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 E4F1Q66K89 784 aaPredicted RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 LCA5Q86VQ0 697 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 LRRC71Q8N4P6 559 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 SPON1Q9HCB6 807 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 SPAG7O75391 227 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 DPEP1P16444 411 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 HNRNPH2P55795 449 aaKnown RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 KRT17Q04695 432 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 DRP2Q13474 957 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 RNF135Q8IUD6 432 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 GPR75-ASB3A0A0A6YYF3 556 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 CTIFO43310 598 aaKnown RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 PDGFRBP09619 1106 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 FGFR4P22455 802 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 PRKCEQ02156 737 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 PID1Q7Z2X4 250 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms